Gene WD1159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD1159 
SymbolpdxH 
ID2738028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand+ 
Start bp1106654 
End bp1107304 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content37% 
IMG OID637173309 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionNP_966875 
Protein GI42520960 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.226725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTAG CACTTATTTT TGCAACGCGT GCCAGAATTA AGATTTTATT TTTTGATATG 
ATATTTTCAC TTGAAAAAGA TCCATTTGAT TTGTTTTCAA AGTGGTACAA AGCAGTACTT 
AATTCTCCGT GTGAACAACC AACTGCAATG ACGCTAGCAA CTTGTAGCAA AGACTGTATT 
CCATCTGCAA GAGTGGTATT ACTAAAGGAA TATAGCAAAG AAGGTTTTGT GTTTTTCACT 
AACGTAAACA GTAAAAAAGG GAAAGAATTG ACTGAGAACC CCAAAGCTGC GTTAGTGTTT 
CATTGGATAG AATTTGCTAG GCAAGTGCGA ATTGAAGGAG AGGTTAAACT TCTAAACGAT 
GAAAGAACTG ACAAATACTT CTCTTCTCGA GCGCTGGGTA GTCAAATTAG CGCATGGTGC 
TCAAAACAAT CGAGCATTCT GAAAGATTGG CAAGATTTTG AGCAAGCTAT AAAATTGAAG 
GAAAAAGAAT TTCACAATAC ACAAGTTTCT CGTCCTGATT TTTGGGTGGG ATTTTGCGTA 
ATCCCAAAAG TAATTGAATT TTGGCAAGAA GGTGAATATA GGAAGCATAT TAGATTTAGA 
TACACTCTTG TTGAGGGAAG CGATTGGAAA GTGGAACAAC TATATCCTTA A
 
Protein sequence
MAVALIFATR ARIKILFFDM IFSLEKDPFD LFSKWYKAVL NSPCEQPTAM TLATCSKDCI 
PSARVVLLKE YSKEGFVFFT NVNSKKGKEL TENPKAALVF HWIEFARQVR IEGEVKLLND 
ERTDKYFSSR ALGSQISAWC SKQSSILKDW QDFEQAIKLK EKEFHNTQVS RPDFWVGFCV 
IPKVIEFWQE GEYRKHIRFR YTLVEGSDWK VEQLYP