| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD1157 |
|---|
| Symbol | pccB |
|---|
| ID | 2738069 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | + |
|---|
| Start bp | 1103979 |
|---|
| End bp | 1105505 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637173306 |
|---|
| Product | propionyl-CoA carboxylase, beta subunit |
|---|
| Protein accession | NP_966873 |
|---|
| Protein GI | 42520958 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.167256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGACT TTAAAATACT AGAAAATCTA AAAACCAAAG CACTAGAAGC TGAAAAAGGA
GGCGGTTCTG ACAGGATTAC CAAACAACAT GAAAAAGGGA AATTAACTGC TAGAGAAAGG
CTCAGTATAT TGCTCGATGA AAGTTCTTTT GCAGAATACG ATAAATTCGT AAAACATCAT
GCAAATGATT TTGGCATGCA AAATGCTAAT TTTTTAGGTG ATGGGGTAGT GATTGGTCGT
GGTACTATTT ATGGCAGAAA AGTTTTTGTT TATTCTCAGG ATTTTACTGT CTTTGGTGGT
TCACTTGGTG CGTCACATGC AAAAAAAATA TGCAAAATTA TGGATATGGC AATTAATGCC
AGAGTTCCAA TTATCGGACT AAATGATTCT GGTGGAGCCA GAATTCAGGA AGGAGTAAAT
TCTCTTGCTG GTTATGGAGA AATTTTTCAA AGAAACGTAA ATGCATCGGG TGTTATACCA
CAAATTTCTT TAATTATGGG CCCATGTGCA GGAGGTGCAG TTTATTCCCC AGCATTAACT
GACTTTACTT TCATGGTGAA AAACAGTTCA TATATGTTTA TAACCGGGCC AGATGTAGTA
AAAAAGGTTA CCTACGAAGA TGTAAGTTTC GAAGACCTCG GTGGAGCAAA AATTCATACA
AGCAAAACAG GAGTAGCGGA TTTTGCATTC AATAATGATG TTGAAATGCT GCTAAAAATG
CGTGAATTCT TTACTTTCTT ACCAGCAAAT AATCAAGAAT CACCAAAATC TGCACCAATC
TGTAATGATG TTGACGACAT TGATGAATCC TTAAACACTC TAATTCCTAC CAATCCTAAT
ACTCCTTATG ATATGTATGA ACTCATTGAA AAAGTTTGTG ATGAAAGGAA TTTCTTTGAA
CTGAAACCTG ATTTTGCTCG TAATATCATA ACTGGTTTTG GTAGAATTGG AGGAAATACT
GTCGGTATTG TTGCAAATCA ACCTATGCAC CTTGCAGGAT GTTTGGATAT TGATTCTTCA
AGAAAAGCTG CGAGGTTTGT AAGGTTTTGT GACGCATTTA ACATTCCGAT CATCACACTT
ATTGATGTTC CAGGATTTTT GCCGGGTACA AATCAAGAAT ACAATAATAT AATACAACAC
GGAGCGAAAC TGCTTTACGC TTACGCTGAA GCGACCGTGC CGAAAATTAG CCTTATCACT
AGAAAAGCGT ATGGTGGTGC ATACATTGTT ATGAATTCGA AACATCTAAA AGGTGATATA
AATTATGCCT GGCCAACTGC TGAAATAGCT GTGATGGGCC CTGAAAGTGC AGTTGAGATT
ATATTTCGAC ACGAAAAAGA TCAGCAAACG TTAATTAAAG AATATAAAGA AAAATTTGCT
AACCCATTTT TTGCTGCATC ATATGGATAC ATTGATGACA TTATAGTGCC AAGTAAAACA
AGGTATCACT TTTGTAAAGC ATTAGAGCTA CTCAAAAACA AGAAGGTAGA AAGGATATGG
AAAAAGCATG ACAACTTACC TCTGTAA
|
|---|
| Protein sequence | MQDFKILENL KTKALEAEKG GGSDRITKQH EKGKLTARER LSILLDESSF AEYDKFVKHH
ANDFGMQNAN FLGDGVVIGR GTIYGRKVFV YSQDFTVFGG SLGASHAKKI CKIMDMAINA
RVPIIGLNDS GGARIQEGVN SLAGYGEIFQ RNVNASGVIP QISLIMGPCA GGAVYSPALT
DFTFMVKNSS YMFITGPDVV KKVTYEDVSF EDLGGAKIHT SKTGVADFAF NNDVEMLLKM
REFFTFLPAN NQESPKSAPI CNDVDDIDES LNTLIPTNPN TPYDMYELIE KVCDERNFFE
LKPDFARNII TGFGRIGGNT VGIVANQPMH LAGCLDIDSS RKAARFVRFC DAFNIPIITL
IDVPGFLPGT NQEYNNIIQH GAKLLYAYAE ATVPKISLIT RKAYGGAYIV MNSKHLKGDI
NYAWPTAEIA VMGPESAVEI IFRHEKDQQT LIKEYKEKFA NPFFAASYGY IDDIIVPSKT
RYHFCKALEL LKNKKVERIW KKHDNLPL
|
|---|
| |