Gene WD1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD1148 
Symbol 
ID2738753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand+ 
Start bp1098113 
End bp1099099 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content32% 
IMG OID637173297 
Productphage integrase family site specific recombinase 
Protein accessionNP_966864 
Protein GI42520949 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0281308 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA AACAGTCGCA AAATAAAAAA GAAAATCTTT ACATAACATA TTACATAGAT 
GCTTTAGCTT CAGAGAGGTC CGCTGCACAA AATACTCTGG AAAGTTATCG TTCGGATTTA 
CACCAGTTTG AAGAATTTTT ATTGGAAAGC GGCACTACCT TGGTTGGTGT AAACAAAACC 
AATATTAAAG ATTATGTGAA ATCTTTATGT ACACAAAAAA AATATAAAAG TAGCTCTATA 
TCAAGAAAAA TATCCGCTAT GAAAAATTTT TACAAGTGTC TATTTAATAA CGGAATAATA 
GATTTTAATC CAGCGCCGGC TAATGATGCT GAATTAAAGA ATCCAAAAGT TTCTCGTCCT 
TTGCCTAAGT ATTTAAGTGT CGAAGAAATA TTTTTGCTAA TAGACACAGT GAGAAAATCA 
GCAAGCGAAT CGAATAAAGA GATAAGCAGT AAAAGGCTAT GTGCGATTTT AGATATCCTT 
TACTCTTCTG GAATGCGTGT TTCTGAACTA ATTAGTATGA AATTATGTGA AGTGTCACAT 
TTAATAAACA GTAATAACAA AGAATGCTAT ATAATAATAA AAGGAAAAAG TGGTAGAGAG 
AGGCAAATTC TTTTTAATGA ACAAGCATTG CAGAGCCTTA GAAATTATTT ATCAGTTCGT 
GATAATCTGA TCTCTAAAGA AAAGGAATCC GATTGGCTAT TCCCAGGTGA TAAACCTAAT 
AAACCAATTA CAAGGCAGAG GGTCGGTCAA TTAATGAAGG AGTTGGCAAG AAAATGCAAT 
ATTGATGAAA ATAAGATCTC TCCACACGTG GTTAGGCATT CTTTTGCTAC CCATCTACTA 
AATAGCGGAG CAAATATTGT GTTGATACAG AAAGTTCTTG GCCATACTAA CCTTTCTACA 
ACACAAATAT ATACTCATAT TGCTAACGAA AAGTTAAAGG ACAAATTAGC TGATTCGCAT 
CCTATTACTC AGATGATCAA TAATTAA
 
Protein sequence
MKNKQSQNKK ENLYITYYID ALASERSAAQ NTLESYRSDL HQFEEFLLES GTTLVGVNKT 
NIKDYVKSLC TQKKYKSSSI SRKISAMKNF YKCLFNNGII DFNPAPANDA ELKNPKVSRP 
LPKYLSVEEI FLLIDTVRKS ASESNKEISS KRLCAILDIL YSSGMRVSEL ISMKLCEVSH 
LINSNNKECY IIIKGKSGRE RQILFNEQAL QSLRNYLSVR DNLISKEKES DWLFPGDKPN 
KPITRQRVGQ LMKELARKCN IDENKISPHV VRHSFATHLL NSGANIVLIQ KVLGHTNLST 
TQIYTHIANE KLKDKLADSH PITQMINN