| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD1105 |
|---|
| Symbol | |
|---|
| ID | 2738165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | - |
|---|
| Start bp | 1059631 |
|---|
| End bp | 1060086 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637173257 |
|---|
| Product | ABC transporter, periplasmic substrate-binding protein, putative |
|---|
| Protein accession | NP_966825 |
|---|
| Protein GI | 42520910 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.165504 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGGT CAAATATACT TGAAATAACC GCTGGATTAT TTGTATTAAT TTTCACTATT
TTTCTGATTT TCTTTGCTAT TGATAAGCTA TCTTACATAA AGAAAAACTA TAAGGATTGC
AATAAAATAT ATGGTCTTTT TGCTAACGCT AACGGTATAG GAGTTGGTGA TAGTGTCAAG
ATCTCTGGTG TAGATGTTGG AAGCATAACT GGTGTATCAC TTGACAAAGC TACCTACGTA
GCACGAATCG ATATGTGTAT AAGCAAAGAC ATAAAATTGC CAATTGATAG TTCAGCTCTG
ATCACTAGCA GTGGAGTTGT TGGCAGTAAA TTTGTTAATA TATCACCTGG ATCAGATATT
AAACTAATCT TGCATGGTGG TAAAATAGAG TATACTCAAG CTGAAGCAAA TATGGGTGGA
ATAATGGACA GAATTCTTGG TATGTTTACA AAGTGA
|
|---|
| Protein sequence | MRRSNILEIT AGLFVLIFTI FLIFFAIDKL SYIKKNYKDC NKIYGLFANA NGIGVGDSVK
ISGVDVGSIT GVSLDKATYV ARIDMCISKD IKLPIDSSAL ITSSGVVGSK FVNISPGSDI
KLILHGGKIE YTQAEANMGG IMDRILGMFT K
|
|---|
| |