| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD1085 |
|---|
| Symbol | |
|---|
| ID | 2737799 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | - |
|---|
| Start bp | 1043741 |
|---|
| End bp | 1046077 |
|---|
| Gene Length | 2337 bp |
|---|
| Protein Length | 778 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637173238 |
|---|
| Product | surface antigen |
|---|
| Protein accession | NP_966806 |
|---|
| Protein GI | 42520891 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
|---|
| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC TATTTTATAT ACTGGTAGTG GTTTTTATTT CTTTTCCTGC CCTGCTTGTT
GCTTTAGGAA CTGCGGAAAA AGTGCAGGTG AAAGATGTCA AATGTATTGG TAATGAGAGG
GTAAGCAACC AGACAATAGG GTTCTATATA AAACTAAAAT CTGGTGATTA TATAAACGAC
GATGATATAG ACTCAATTAT AAAAGATCTA TATAAAACAA AGTTATTTGC TAGTGTTAAT
GCTTACATAG ATGATAAAAA AAATTTAGTA ATAAAAATTC AAGAAAATCC ACTGATTAAC
AAGGTAGTGT TAAAAGGCAA TAAGTTATTT AACAGCAAAG AGCTGCTAAG TAATGTGATT
CAATCAAAGT CGCTAACTAT TTTAACTGAA ACAAAATTGC AAAACGATTT AGTGAATTTA
GTCACTACTT ATAGAAATAA CGGTAAGATT GGTGTTAAAA TTGAATATGA CCTGAATAAG
CTTGATGGCA ATAGAGTCAA TCTAATTTTT AAAATAAAAG AAGGCAAAAC CTCTAAAATT
AAGGATATAA GATTTATAGG CAACAAAAAC TTTTCTGAAA ATGAGCTAGA GCAAGTTATC
AAAAGACATA GTAATGACAT ATTTAGTAAG TTATTTAGAG CTATTTTAAA AGGCGGAAAT
CATTATTCAC CGCAATATCT ATTGATTAAC ACAGAATTGC TCGATCATTT TTATTCATCT
AAAGGATATA TTCAAAATAA TATTCAACCA ATTGTTGAGG TTGATAATAA CAATCAAACA
GAGTTAACTT TTTTGATTGA CGAAGGACAG CAGTATTTAT TTGGAAATAA TGAGGTTAAT
ATTGAAACTG AAATTCAGGA TTTGAGCCTA AAAGAAGAAA TATTGGATTT TATAACAGAG
GAAAACGATA AGATATTTAA TAGAGTTAAA ATTAATAATA CAGTAGAAAA AATAAACAAA
TATTTAAATG AGAAAGGATA TATATTTGCA AAAGTTAATC CAGAGTATGC ACAACGTGAC
AATGTTGTAG ATGTAACCTA CAGAGTGCTG CCGGGTAAAA AGATTTATAT AAATCAAATT
ACAATTGATG GTAACGATCG CACTTTAGAT AAAGTGATCA GAAGTAAGCT AAGTGTAGCA
GAAGGTGATG CGTACAATAT ATCTGAGATT CAAAAGTCAC GTAAAAAACT AATGAGTAGT
GATTTTTTTG AAACAGTGAA AGTAAATAGT TATGCAGTTA ATGATAATGC AGTAAATCTT
GACTTAAGTG TTAAAGAAAA AAACACTACT TCGTTGTATT TGGGAGGAGG TGTGTCTCTT
CCTGGTGGAG CATTGATTAA AATTGACCTC AAAGACCGTA ATTTATTTGG TACTGGAAAA
GAGCTCTCTT TTGCTCTTGA AAAAAGTCAA TACGTATTTT CTACTGATTT AGAGTTTGTT
GAAAATAATT TTAACGATTC TGATACGTCA CTAGGCATGG GTGTATTTTA TGAAAAACAA
GATAAACCAA ACACTACTTT TGATAGTTGC GATATGGGAT TTTTTACAAA GTTATCATAT
AAAGTCACAG AGAACTTAAC TAATTCCCTT CGCTATTCTT ATAAGTATAA TCATATACAC
ATGGATCATA AGGGTGGACA AGACACCGAT ATCTCTGAAA TAATACTGGA CCGAAAAGGT
AAACATCAGA TTTCATCAGT GGGATACACG TTGGCATATA ATAAACTGGA TAACCTCTAT
ACTCCAAAAG AAGGGTATTT ACTGCGCTTA AGTCAGGATA TTTCAGGATT GGGAGGAAAC
GTGAATTTCC TGAAATCTGA ATTCTTATCT TTTTATACGC ACCCTATATT AAGCAAAATT
GACGATGATA TAACGCTACG CTTTAAGATG GCGGCAGGTC ATATTTTTTC TTATACTGAT
GAAAATCTAA ACATTGGCCA GCACTTTTTT AAAGGGGGTA ATGAGATTAG AGGGTTTGAC
CTTTCCGGTA TTGGACCAAG AGCAGAAGAC AAAAATAAAA GCTCATTAGG AGGCAAAACT
TATTTTAATC TAACACAGCA AGTGGATTTT CCTCTACCAA AACTATATGA CTATGCTGGT
ATCAAAGGCT CACTATTTGT TGACTATGCA ACACTTTTTG GCTTAGATGA TAAAAATAAG
AAGTATGAAG GGAAATACTA TGATAGCAAG CTTGTGAGAG TGTCACCAGG TTTTGGCTTT
TCAATGCTTT CTCCTTTTGG TAGACTTAGA TTGGATTTCG GGTTTCCTTT AGTAAAGGAA
TCTTATGATA TAATACCATC ACCAAATGTT AAATTTTCTA TTGAAGCGGG GATTTGA
|
|---|
| Protein sequence | MKKLFYILVV VFISFPALLV ALGTAEKVQV KDVKCIGNER VSNQTIGFYI KLKSGDYIND
DDIDSIIKDL YKTKLFASVN AYIDDKKNLV IKIQENPLIN KVVLKGNKLF NSKELLSNVI
QSKSLTILTE TKLQNDLVNL VTTYRNNGKI GVKIEYDLNK LDGNRVNLIF KIKEGKTSKI
KDIRFIGNKN FSENELEQVI KRHSNDIFSK LFRAILKGGN HYSPQYLLIN TELLDHFYSS
KGYIQNNIQP IVEVDNNNQT ELTFLIDEGQ QYLFGNNEVN IETEIQDLSL KEEILDFITE
ENDKIFNRVK INNTVEKINK YLNEKGYIFA KVNPEYAQRD NVVDVTYRVL PGKKIYINQI
TIDGNDRTLD KVIRSKLSVA EGDAYNISEI QKSRKKLMSS DFFETVKVNS YAVNDNAVNL
DLSVKEKNTT SLYLGGGVSL PGGALIKIDL KDRNLFGTGK ELSFALEKSQ YVFSTDLEFV
ENNFNDSDTS LGMGVFYEKQ DKPNTTFDSC DMGFFTKLSY KVTENLTNSL RYSYKYNHIH
MDHKGGQDTD ISEIILDRKG KHQISSVGYT LAYNKLDNLY TPKEGYLLRL SQDISGLGGN
VNFLKSEFLS FYTHPILSKI DDDITLRFKM AAGHIFSYTD ENLNIGQHFF KGGNEIRGFD
LSGIGPRAED KNKSSLGGKT YFNLTQQVDF PLPKLYDYAG IKGSLFVDYA TLFGLDDKNK
KYEGKYYDSK LVRVSPGFGF SMLSPFGRLR LDFGFPLVKE SYDIIPSPNV KFSIEAGI
|
|---|
| |