| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD1028 |
|---|
| Symbol | hemE |
|---|
| ID | 2737955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | + |
|---|
| Start bp | 988766 |
|---|
| End bp | 989782 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 637173184 |
|---|
| Product | uroporphyrinogen decarboxylase |
|---|
| Protein accession | NP_966753 |
|---|
| Protein GI | 42520838 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAGCG GCAAAACAAC AATAGCGAAA ATTATTAAGA GAAATGAGCC GGGTGGAAGA
GTGCCTATCT GGCTAATGCG TCAGGCTGGC AGGTCTCTTC CTGAGTACCG CAAAGCAGTA
GAAAATATGA ATAATTTTAT GGAGATATGC TACAACACAG ATTTAGTGAC AGAATTGACG
TTACAGCCGG TGACAAGATT TGACATGGAT GCGGCGATAA TTTTTTCAGA CATTTTAATA
ATAGCTGATG TTTTGGGTTG TGACGTGAAT TTCGTACGCG GTGTAGGTCC AATAATAAAA
CCCGTGGAAA GTCCTAAGGA ATTGAAGGGT CCACAAGAAA TTGAAACTAA AACCTTACCA
ATTCTAAACG CTATAAAAAA AGTCAGAAGC CAATTACCAA AAGAAAAATC TCTCATAGGA
TTTGCTGGTG GACCATGGAC AGTAGCCTCA TACATCATAG AAGGTAGGAG CAGCAAAACT
TTTTCCAAAG TATTAAATTT TTATCCTTCG TGTTTGAAGG AAATAATTGA ACGAATAACG
GAAGTAACGA TTATTTATCT AATTAAACAG ATAGAATTTG GAGCAGATGT TATTCAGCTA
TTTGACAGTA ATGCTGGTGC GTTATCGGAA CCATTGTTTA AAGAATATGT TATCGAACCA
ACAAAGAGAA TTATCTTGGC AATAAAGGAT AGATTTTCTG ATTTTCCAAT AATAGGTTTT
CCAAGGTCTG CTGGAAATCT TTATAAAGAT TACTGCGAAC AAACAGGTGT ATCTGCAGTA
AGTATAGATT ATAATGTTCC AATAAAATGG GCGAAAGCGA ATCTAAACAT CCCTCTACAA
GGAAACCTTG ATCCTAATCT TTTAGCCTAT AATAAAACGG AAGCAATCAA AGAAGCAAAA
CGTATAATAG ATTGCTTTAG AGATTTACCC TTCATATTTA ATCTCGGACA TGGAGTACTC
CCTGATACTC CAGTTGAAAA TATTGCTGCA TTGGTAAACC TGGTAAAAAG CTACTAA
|
|---|
| Protein sequence | MESGKTTIAK IIKRNEPGGR VPIWLMRQAG RSLPEYRKAV ENMNNFMEIC YNTDLVTELT
LQPVTRFDMD AAIIFSDILI IADVLGCDVN FVRGVGPIIK PVESPKELKG PQEIETKTLP
ILNAIKKVRS QLPKEKSLIG FAGGPWTVAS YIIEGRSSKT FSKVLNFYPS CLKEIIERIT
EVTIIYLIKQ IEFGADVIQL FDSNAGALSE PLFKEYVIEP TKRIILAIKD RFSDFPIIGF
PRSAGNLYKD YCEQTGVSAV SIDYNVPIKW AKANLNIPLQ GNLDPNLLAY NKTEAIKEAK
RIIDCFRDLP FIFNLGHGVL PDTPVENIAA LVNLVKSY
|
|---|
| |