Gene WD0925 details

Gene Information

• Locus tag: WD0925
• Symbol: metC
• ID: 2738127
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: -
• Start bp: 890031
• End bp: 891242
• Gene Length: 1212 bp
• Protein Length: 403 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 637173089
• Product: cystathionine beta-lyase
• Protein accession: NP_966663
• Protein GI: 42520748
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR01324] cystathionine beta-lyase, bacterial

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.00339
• Plasmid hitchhiking: No
• Plasmid clonability: unclonable

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAGGAAG AGTCTATATT AGTTAAAGCA GGAAGAAAAT TTAATGACTA TAAAGGTTCC 
ATGAACCCGC CAGTTTATCA TTCTTCTACC ATATTATTCC CTACTTACAA GGACTACTTA 
AATGCAGCAA ATGGAGAAAG TATATACGAT GTAATCAACG ATGGTGTTGC AAGGGATTAT 
AGCTACAGTA ATGTTGGTAC TCCTACTGTT CATTATCTTT CAAATGCACT GGCTGAAATT 
GAAGGGAGTG GACAAGCGCT TATTTATCCT TCCGGACTAT TTGCACTTAC TTTTGCTATT 
CTAACTTTCG CTAAAGCAGG CTCGCACGTT TTAATTCAAG ATAATAGTTA TTATAGGCTT 
AGGAGGTTTG CAGAAAATGA GCTACCAAAA AGAGGAACAG AAGTAACTTT TTATGATCCA 
ACACAGGATA TAACTGATTT AATTCAGAGT AATACTTCAT TGATAATGAT CGAGACTCCT 
GGTTCTGTAA CGTTTGAGAT TTCGAATATA GAGCATATAG TAAAAGTTGC TAAGGAACAT 
AAAATTGTGA CCGTTTGTGA CAATTCATGG GCCACTCCTT TGTTATTTAA GCCGCTTGAT 
TATGGAGTTG ATGTTGCACT ATATGCGGTG ACAAAGTATC TAGCCGGTCA CTCAGATTTA 
GTGATGGGGG CTATTATTGC TGAAGGTGAA ATTTTTAAAT TGCTTTATGA GAGCTATAAA 
AATTATGGGG TAACCATTCA ATCGCACGAC TGCTACCTTG CACATAGGGG ACTTAGAACA 
TTGTACACAC GTATGAAAAG GCACCAAAAT ACAGCAATGG AAGTGGCAAA GTGGCTAGAA 
AAACATTCAA AAATCAAAAA AGTTTTGTAT CCAGCACTTC CCTTCCATCC TCAACACGAA 
TTATGGAAAA GTTACTTCAA AGGAGCAAGC GGCACATTCA GTATAGCACT AGATAGAGAA 
TATTCATGTG AAGAACTAAG CTGCATGGTT GATCACATGA AAATTTTTGG TATCGGTGCT 
TCTTGGGGAG GATGCGACAG TTTGATATTA CCAATAGATC GTAGATCTAT GTCAAGATCT 
GTAATGAATT CAGATTATGG TGGAAGTTTT ATACGGATAT TTTGTGGACT GGAAGATCCT 
GAAGATTTAA TCTCTGATTT AAATGCTGCA CTAGCAAGGT TGCCATGTTT GAACACTAAA 
ACTGGCAGAT GA 

 

Protein sequence

MKEESILVKA GRKFNDYKGS MNPPVYHSST ILFPTYKDYL NAANGESIYD VINDGVARDY 
SYSNVGTPTV HYLSNALAEI EGSGQALIYP SGLFALTFAI LTFAKAGSHV LIQDNSYYRL 
RRFAENELPK RGTEVTFYDP TQDITDLIQS NTSLIMIETP GSVTFEISNI EHIVKVAKEH 
KIVTVCDNSW ATPLLFKPLD YGVDVALYAV TKYLAGHSDL VMGAIIAEGE IFKLLYESYK 
NYGVTIQSHD CYLAHRGLRT LYTRMKRHQN TAMEVAKWLE KHSKIKKVLY PALPFHPQHE 
LWKSYFKGAS GTFSIALDRE YSCEELSCMV DHMKIFGIGA SWGGCDSLIL PIDRRSMSRS 
VMNSDYGGSF IRIFCGLEDP EDLISDLNAA LARLPCLNTK TGR