Gene WD0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD0788 
SymboldapE 
ID2738849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand+ 
Start bp761509 
End bp762705 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content36% 
IMG OID637172964 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionNP_966542 
Protein GI42520627 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.770498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTG ACCCTGTAGA GCTAACTAGG AAATTGATCT CTTTTGAGAG TATAACACCA 
GAAGACAGCG GGGCAATAGA GTATATAGCA ACAATCTTCA AGAAGAGCGG CTTTGATTGT 
GAGATTTTAG AATTTGGTGA TAAAGTTAAA AATCTTTATG CGAAATATAT AAATGGAGTG 
CCAAATTTGT GCTTTGCTGG GCACGTTGAT GTTGTACCAC CGGGTCAGTT AAAAGATTGG 
GCATTTGGTC CATTTAAACC AGAAGTGAGG GATGGAATGC TATATGGAAG AGGGGCCGCT 
GATATGAAAA GCGGAGTAGC TGCATTTATT GCTGCTATGG TAAATTTGAT TGCAGAGAAG 
TTTCAATTTA ATGGTTCAAT AAGTGCATTG ATTACCAGTG CTGAAGAAAG CATGGAAGAA 
TATGGAACAA AGGCAGTTTT GGAATGGATG AAAAATAAGC AGAAAAAGAT AGATTTTTGT 
GTGGTTGGCG AACCAACCAG TAGTGAGAAA TTAGGTGATA CCATAAAAAT AGGCAGAAGA 
GGTTCTGTAA CATTTGAATT AATTTGCCAT GGAAAACAAG GGCACGTTGC CTACCCAGAC 
CTAGCAGACA ATCCAATATA TAAGGTAATA TCGATATTGA GTAAGGTAAA AAATACTACT 
TTTGATCATG GTAATAAATA TTTTCAGCCT TCACATTGCG AAGTTACTAC TATCGATGTT 
GGAAATAATA CTAGCAATCT AATACCTGGC TCAGCAACTA CACGTTTTAA CATTCGATAT 
AACAATGAAC AAACACCGGG TGGCTTATAT AAGCTGATTG ATGAAATATG CTCCAGTGTA 
ACTAACGATT ATAAACTTTC TATGCATAGC AGCAGGGACG TTTTCCTCTC TACTCCCGAT 
AGAAATACTG ATATTATGCT TGATGCAATA AGTAAGGTTA CCAACATTGA TGCTATACTT 
AGCACAAGTG GTGGCACATC TGACGCTGCG TTTATCAAAG ATGTTTGTCC AGTGATTGAA 
TTTGGTATAA TCAACAAAAC TGCACATCAG ATAAACGAAT GCGTATCAGT AAACGATATA 
CACAAGTTAA CAGCTATATA TAAGGAATTT ATAGAAAATT ATTTCAATCC CACTAATAAA 
ATATTGAATC AGGTCAACGT AGTTAGTAAT ATATCTAGTG GTCCATTGTT AGCTTAG
 
Protein sequence
MKIDPVELTR KLISFESITP EDSGAIEYIA TIFKKSGFDC EILEFGDKVK NLYAKYINGV 
PNLCFAGHVD VVPPGQLKDW AFGPFKPEVR DGMLYGRGAA DMKSGVAAFI AAMVNLIAEK 
FQFNGSISAL ITSAEESMEE YGTKAVLEWM KNKQKKIDFC VVGEPTSSEK LGDTIKIGRR 
GSVTFELICH GKQGHVAYPD LADNPIYKVI SILSKVKNTT FDHGNKYFQP SHCEVTTIDV 
GNNTSNLIPG SATTRFNIRY NNEQTPGGLY KLIDEICSSV TNDYKLSMHS SRDVFLSTPD 
RNTDIMLDAI SKVTNIDAIL STSGGTSDAA FIKDVCPVIE FGIINKTAHQ INECVSVNDI 
HKLTAIYKEF IENYFNPTNK ILNQVNVVSN ISSGPLLA