Gene WD0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagWD0658 
SymbolrpoA 
ID2737904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameWolbachia endosymbiont of Drosophila melanogaster 
KingdomBacteria 
Replicon accessionNC_002978 
Strand
Start bp645213 
End bp646280 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content35% 
IMG OID637172839 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionNP_966422 
Protein GI42520507 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.535556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTATA ATAATGATGT TTCTCTCTGT AGCAATTTAG ATAAATTGAT TAAACCTAGT 
TCAGTTAAGG TAGTATCAGA TGATTCAAGT GAAAAAAGTG ATATAGTGCT AGAACCGTTG
GAAAGTGGTT TTGCTTTAAC ATTAGGCAAT GCATTAAGAC GTGTAATGTT ATCTTCTCTT
AAAGGTAGTG CTGTTTATGG AATAAAAATT GAAGGTGTAA CTCATGAGTT CACTTCAATT
CAAGGGGTGA GAGAAGACGT AACTGATATA GTATTAAATA TGGGTATGTT GAGGTGTAAA
TTAAATGGTG CTTCTAATAA ATGCTTAAAT TTAAACGCTA AAGGGCCTTG CCAGGTATTA
GCTGGGATGA TAGAAACTGA TGATCAATGC TCTATTGTTA ATAAAGATTT GTTAATATGT
ACGCTGGGGC AAAATGTGGA GCTTAACATG ACCATATATG TGGCTAGCGG AAAAGGTTAT
CTTCCTGTAA CTAAATATAA AGAAAATGAA CTTTTGAAGC TTATGAGTGA ACAGGATTTA
ATTGGTTTTA TTCCAGTTAA TGCTTTGTAT AGCCCTGTCA ACAGGGTTTC GTACAGGGTA
GAGAACAGTC GTGTTGGCCA AGTGACTGAT AAGGATAAGC TGATATTGTC AATTGAAACT
GATGGTACAA TTTCTCCGAG TCAAGCTGTT GACTCTGCTG CAAGAATATT ACAGGAGCAA
CTTCAGCCCT TTATTAGTTC TGATGTAAGT TATAAAAAAT CGCAGGTTTC TTCGTCTAGT
GGTGCTAAAG ATTTGGGTTA TGACCCTGTC TTATTGCGTA AGGTAGATGA AATGGAATTA
TCTGTCAGGT CTCATAACTG TCTGAAAAAC GAAAACATCA CTTATATAGG TGATCTTGTA
CAAAAGACAG AAGGTGAAAT GTTAAGAACT GCTAATTTTG GCAGAAAGTC TTTGAATGAG
ATTAAGGCAG TTTTGACTAA TTTTGGCTTG TCTTTGGGTA TGAATGTGCT AAACTGGCCA
CCTAAGGATA TAGATGAGTT GGCTAAACAA CATACTGATG AAGATTAG
 
Protein sequence
MYYNNDVSLC SNLDKLIKPS SVKVVSDDSS EKSDIVLEPL ESGFALTLGN ALRRVMLSSL 
KGSAVYGIKI EGVTHEFTSI QGVREDVTDI VLNMGMLRCK LNGASNKCLN LNAKGPCQVL
AGMIETDDQC SIVNKDLLIC TLGQNVELNM TIYVASGKGY LPVTKYKENE LLKLMSEQDL
IGFIPVNALY SPVNRVSYRV ENSRVGQVTD KDKLILSIET DGTISPSQAV DSAARILQEQ
LQPFISSDVS YKKSQVSSSS GAKDLGYDPV LLRKVDEMEL SVRSHNCLKN ENITYIGDLV
QKTEGEMLRT ANFGRKSLNE IKAVLTNFGL SLGMNVLNWP PKDIDELAKQ HTDED