Gene WD0437 details

Gene Information

• Locus tag: WD0437
• Symbol: sdhA
• ID: 2738774
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: +
• Start bp: 418353
• End bp: 420152
• Gene Length: 1800 bp
• Protein Length: 599 aa
• Translation table: 11
• GC content: 43%
• IMG OID: 637172641
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: NP_966226
• Protein GI: 42520311
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAAGT CAGCGTATGA GATCATAGAA CATGAGTATG ACGTGGTAGT AGTAGGTGCA 
GGTGGAGCAG GGCTCAGAGC AACGCTTGGG ATGGCTGCAA CTAATTTTTC AGTTGCCTGC 
ATTTCTAAAA TTTTCCCTAC ACGAAGTCAT ACAGTTGCAG CACAAGGCGG AATTAGTGCA 
GCTTTAGGTA ATATCGGTGA AGACGATTGG CGCTGGCATG CATATGACAC AATAAAAGGT 
TCAGACTGGC TTGGTGATCA AGATGCAATA GAATATATGT GTAAAAACGC TGCTAAAGCT 
GTTATTGAAC TTGAAAATTT TGGCGTACCT TTTTCTCGTA CAGAAGATGG CAAAATATAC 
CAGCGTTCCT TTGGTGGAAT GACAACTCAC TTTGGTAAAG GAAAATCAGC GCAGCGCACT 
TGTGCGGCAG CAGATAAGAC TGGGCACGCA ATCCTTCACA CTCTATATCA GCAGTGTCTT 
AAATTCAACG CTGAATTTTT TGTTGAATAC TTTGTGATTG ATTTAATTAT GGATAGCGAA 
ACATGCTGCG GAGTTCTTGC TTGGTCGCTA TGCGACGGCA CATTACATAG ATTTCGTGCG 
CATAGAGTGG TGCTAGCAAC AGGTGGATAT GGACGTGTTT ATTTCTCTGC AACAAGTGCG 
CATACCTGCA CAGGTGATGG TAATGGCATG GTAGTAAGGG CTGGATTACC ACTTGAAGAT 
ATGGAATTTG TACAATTTCA TCCAACAGGA ATATATGGCT CAGGGTGCTT GATGACAGAA 
GGATGCCGTG GTGAAGGGGG GTACCTCGTT AATTCTCAGG GCGAGAAGTT TATGGAACGT 
TACGCACCAA AAGCAAAAGA TTTAGCTTCC CGTGATGTGG TAAGTCGCGC AATAACAATT 
GAAATTAGAG AGGGAAGGGG GGTTGGACCA AAAAAAGATC ATATGTATTT AACTATAGCG 
CATCTTGATC CGGAAGTAAT AAAACTCAGA TTGCCGGGCA TCAGCGAAAC CGCAAGAACT 
TTTGCTGGAG TTGATGTCAC TAAAGATCCA ATACCGGTCA TTCCGACTGT TCACTATAAC 
ATGGGTGGCA TTCCAACCAA TTATTATGGA GAAGTGATCA CGCTGAAGCA AGGTAAGGAA 
GAGGTAGTAG ATGGACTATT TGCAATTGGA GAAGCTGCGT GTGTCTCTGT GCACGGTGCA 
AATCGACTTG GCTCTAACTC GCTTCTTGAT CTTGTGGTTT TTGGTAGAGC TGCAGCGCTC 
AGAGCAAAAG AGAAGCTAAA GTCCGGTACA CCACATAAAA AATTGCATTC AGACTGCACA 
GACTGGATAG TAGATAGATT TAATAAAATG CGATTTGCTT CCGGTGGGCT AAAAGTAGCA 
AAAATACGCG GTGAAATGCA GAACACTATG CAAAAATACG CATCAGTTTT CCGTGTTGCT 
GAAGTTTTAG AAGAAGGCAA AAAAGCTATA AAAAAGGTAG CAAAAATGAT GCCTGATATT 
TCACTTGAGG ATCGCAGTAT GATGTGGAAC AGTGATTTAG TTGAAGCGCT GGAGCTTGCT 
AACATGATCC CACAAGCGGT TATTACCATG GAATGCGCAG CTAATCGCGA GGAAAGCAGA 
GGTGCACATG CTCGTGAAGA CTTTCCTGAA CGTGATGACA AAAACTGGAT GAAGCACACT 
ATAGCGTGGC TTGAAGAAAA GAAAGGGCAA ATTAACGTAA AAATTGATTA TAAAAAAGTG 
GCTGAAAAAA CTCTGAGCGG TGAGATTGAT TTCATAGCGC CAGAGAAGAG GGTTTATTAG 

 

Protein sequence

MDKSAYEIIE HEYDVVVVGA GGAGLRATLG MAATNFSVAC ISKIFPTRSH TVAAQGGISA 
ALGNIGEDDW RWHAYDTIKG SDWLGDQDAI EYMCKNAAKA VIELENFGVP FSRTEDGKIY 
QRSFGGMTTH FGKGKSAQRT CAAADKTGHA ILHTLYQQCL KFNAEFFVEY FVIDLIMDSE 
TCCGVLAWSL CDGTLHRFRA HRVVLATGGY GRVYFSATSA HTCTGDGNGM VVRAGLPLED 
MEFVQFHPTG IYGSGCLMTE GCRGEGGYLV NSQGEKFMER YAPKAKDLAS RDVVSRAITI 
EIREGRGVGP KKDHMYLTIA HLDPEVIKLR LPGISETART FAGVDVTKDP IPVIPTVHYN 
MGGIPTNYYG EVITLKQGKE EVVDGLFAIG EAACVSVHGA NRLGSNSLLD LVVFGRAAAL 
RAKEKLKSGT PHKKLHSDCT DWIVDRFNKM RFASGGLKVA KIRGEMQNTM QKYASVFRVA 
EVLEEGKKAI KKVAKMMPDI SLEDRSMMWN SDLVEALELA NMIPQAVITM ECAANREESR 
GAHAREDFPE RDDKNWMKHT IAWLEEKKGQ INVKIDYKKV AEKTLSGEID FIAPEKRVY