| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD0301 |
|---|
| Symbol | coxA |
|---|
| ID | 2738695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | + |
|---|
| Start bp | 280476 |
|---|
| End bp | 282026 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637172514 |
|---|
| Product | cytochrome c oxidase, subunit I |
|---|
| Protein accession | NP_966102 |
|---|
| Protein GI | 42520187 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.249737 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG TACCAAAGGG CATAAAGCGT TGGTTGTTTT CCACCAATCA TAAAGATATA
GGGACACTGT ACATTATTTT TTCCATATTA GCTGGAATTA TTGGTGGATT ATTATCGGTG
ATTATTCGCA CTCAGCTAAT GCACATTAAT ATACTTAACA ATAACTATCA ATTATATAAC
GTAATGGTTA CAGGGCATGC GTTGATAATG GTGTTTTTTA TGATAATGCC AGCCCTCATG
GGAGGATTTG GTAACTGGTT TGTACCTCTC ATGATTGGCG CACCAGATAT GGCATTTCCT
CGTATGAATA ATTTAAGTTT TTGGTTATTA GTGTCATCTT TTATTTTGCT CATTCTCTCA
GTGTTTATTG GTGAAGGTCC AGGTACAGGT TGGACTTTAT ATCCACCTCT ATCACAGGTA
ATGTCCCATC CAAGTGCAGG AGTTGACATT GCTATACTTG CACTTCATGT TGCTGGTATG
TCGTCAATTG TTGGGGCGAT CAACTTTATA GTTACTATAT TTAACATGCG CACAAAAGGA
ATGTCATTAA CTAAGATGCC ACTGTTTGTT TGGTCTGTCT TGCTAACAGC ATTTATGTTG
ATTGTTGCCT TACCAGTGCT TGCCGGTGCT ATAACTATGC TTCTTACTGA TCGCAATATT
GGTACTTCCT TTTTTGATCC TGCCGGTGGC GGCGATCCTG TGTTATTTCA ACATCTATTT
TGGTTTTTTG GTCATCCAGA AGTTTACGTA ATTATTTTTC CTGCATTTGG CATCATAAGT
CAGGTTGTAT CAACTTTTTC TCACAGACCT GTATTTGGTT ACATAGGGAT GGTTTATGCA
ATGATAGGTA TAGCAGTATT TGGCTTTATG GTTTGGGCTC ACCATATGTT CACTGTTGGG
CTTAGTGCTG ACGCTGCTGC ATTTTTTAGC ACTACCACAA TTTTTATCGG TGTTATAACT
GGTGTAAAAG TCTTTAGCTG GATTGCAACT ATGTGGGGTG GAGCAATTGA GTTTAAGACC
CCTATGCTAT TTGCACTAGG TTTTATTTTC ATGTTTGTTG GCGGTGGCAT AACGGGAATA
ATTCTTTCTC ATGGTGGAAT AGATAAGCTC CTGCACGACA CCTATTATGT TGTTGCTCAC
TTCCATTATG TCATGTCACT TGCTGCATTA TTTGGAGCTT TTGCTGGCTT TTATTATTGG
ATTGGTAAAA TGTCGGGTAA ACAATATAAT GAGCGCTTAG GTCAAATCCA CTTTTGGCTT
ACTTTTATTA GCACCAATAT CACTTTTTTA CCTCAACATT TCTTAGGATT AGCTGGTATG
CCAAGGCGTA TACCTGATTA TCCTGATGCG TTTATCCCTT GGAATTATAT ATCCTCAATT
GGTTCGTATA TGTCCTTTGT TTCAGTTATG TTTTTTGTGT TTATAGTTAT ACATCTTTTT
AAATGGGGCA AGAAAGCTGG AGATAATCCT TGGGAAGGTG ACACCTTGGA ATGGACGGTA
TCTTCACCAC CGCCTTTTCA TACTTTCGAA AAGCCACCAG TGGTAAAATA G
|
|---|
| Protein sequence | MSDVPKGIKR WLFSTNHKDI GTLYIIFSIL AGIIGGLLSV IIRTQLMHIN ILNNNYQLYN
VMVTGHALIM VFFMIMPALM GGFGNWFVPL MIGAPDMAFP RMNNLSFWLL VSSFILLILS
VFIGEGPGTG WTLYPPLSQV MSHPSAGVDI AILALHVAGM SSIVGAINFI VTIFNMRTKG
MSLTKMPLFV WSVLLTAFML IVALPVLAGA ITMLLTDRNI GTSFFDPAGG GDPVLFQHLF
WFFGHPEVYV IIFPAFGIIS QVVSTFSHRP VFGYIGMVYA MIGIAVFGFM VWAHHMFTVG
LSADAAAFFS TTTIFIGVIT GVKVFSWIAT MWGGAIEFKT PMLFALGFIF MFVGGGITGI
ILSHGGIDKL LHDTYYVVAH FHYVMSLAAL FGAFAGFYYW IGKMSGKQYN ERLGQIHFWL
TFISTNITFL PQHFLGLAGM PRRIPDYPDA FIPWNYISSI GSYMSFVSVM FFVFIVIHLF
KWGKKAGDNP WEGDTLEWTV SSPPPFHTFE KPPVVK
|
|---|
| |