| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD0232 |
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| Symbol | |
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| ID | 2737991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002978 |
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| Strand | + |
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| Start bp | 217906 |
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| End bp | 220032 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637172454 |
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| Product | cytochrome c-type biogenesis protein CcmF, putative |
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| Protein accession | NP_966042 |
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| Protein GI | 42520127 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF
[TIGR02697] Wolbachia palindromic element (WPE) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAC TTGGGAATAT ATTGCTATTG CTAGCCTGCT TATTGTCTTT GACATATTTG
TTTTTACCGC TTAGTTCTTG TCGGTTTATT ACCACTGCCA TATTTTTTTG TGTATCAGCG
TCAATGGCTA TTTTGATCTA CTGCCACATT ACAAATGATT TTTCACTTGA AAACGTATAC
TACCACTCAC ACACAACAAA ACCTTTGATC TACAAGATTT GTGGTGTTTG GGGAAACAAA
GAAGGGTCCA TGTTGCTTTG GACCTTAGTG CTTGTCATGT ATTTATTACT AATGGATATT
TATATACCTT CTGTCATCCC AGTTTCCCCC TCTGTCATCC CAGTCTCTTC TTCTGTCATC
CCAGTGCCCA GACACTGGGA TCCAGACAAT TTAATTGCAA ATGAGTACAT CAAATGGCAG
TGTAATAAAA ACTGGATTCC AGTGTCAAGC ACTGGAATGA CACCAGAACG AACTAATGGT
AGTAAATTAA AAAAAATATC TCTTATCACT CATGGGCTGA TTTGCTTTTG TTTTTTGCTG
TTCACTTTAA TTGAATCCAG CCCCTTCACT AAAATGCCAG GCATTGAAAC AGATGGATTG
GGTTTTAATC CGATATTGCA GGATATAGGC CTTGCTATTC ATCCACCGAT ATTATATTTG
GGGTACCTTG GATTTAGCGT TCCTTTTTCG CTCTCTATAG CTGGATTAAT TTTAAATACT
GAAGGAAATG TTTGGGCTAA AATTGTCAGG CCTTGGGTAC TTATTTCTTG GTCGCTGCTC
ACTTTGGGCA TCAGCTTGGG TAGCTGGTGG GCATATCGCG AACTTGGGTG GGGTGGATTT
TGGTTTTGGG ATCCAGTGGA AAACGTTTCT TTGATGCCGT GGCTAATTGC AGTAGCGCTG
ACACATTTGT TGCTCGTGGT ACGGAATTTC AATGTTTTAA GGAACTTTGC TATTTTACTT
ACGCTTACAA CTTTTATATT GAGTGTGACT GGAACATTTC TAGTCCGCTC AGGAATACTT
ACCTCAGTGC ACACGTTTGC AGATGACCCA AGATATGGAC TATATATATT AGCTCTACTT
GGTGTAATTA CAGTCAGTAG CTTAGTAATA TTTGTAGTAT TTACGAGAAA AAATCACACG
CCTGCGATGT CATTCCAATG CTTGACACTG GAATCCAGAA AGAAACTTGC TACTCAAGTG
ACAGAAGGTA GAAGATTCTT TTCACGCTTT ACGATGATAC TGATGAACAA TTTATTATTC
ATCACTGCCT TTTTCATCGT GTTCGTTGGC ACTTTATACC CTACAGTGCT TGAGTATTTA
ACCGGTGAAT TAATTTCAGT TGGAGCACCA TATTACAATT CTTTATTTAA CTCTATTGCA
CTAGCTATTC TAGTGCTCAC CATGATCGGG CAATACTGCA GTTGGCAGGG AAATAGTCTA
TTGCCAATAT TCCGTGAATA TAGATTTTCA TTCTGCAGTG CTGCAGCTAT TTTGCCGTTT
ATCTTTCACA TGGAGCTAAT AATTGTGCTA TCAATTACTA TCTCCATAGC ATTATTAATC
TTTGTTTTAG AAGCATACAG TAAAAGAATT CGTTTATTTA AGGTAGCATT TGGTGAATCA
ATTTTATTAG CAAGAAGAGT TTCTAAGTCC TACTATGCAA TGATGCTTGC TCATGCTGGA
GTGGCAATTC TAGTGCTTGG TATAGCTTAT TCAGTTGGTT GGCAGGAGAA AAAAGAAAAT
TACTTAAAAA TAGGGGATAG CATAACAGTC AATAAATTTA AAGTTACTTT ACGCAATATT
GAGCTAATAA AAGAAAAAAA TTTCCATGCA GTGAGGGGTA CAATGGATAT CAGGAATTTG
CTGAATAATA AGATATTAGG TGAAGTAACT CCTGAATATA GATTTTACCT TGCGGAAGGT
CAGAAAAATG TTGAAAGCAG TATCTACCAC AATTTGCTTT CTGATATTTA TGTTGTAATT
GGAGAGATTG ATAAGAGTAA GAGCAAAATC GCAGCCAAAG TGCACTATAA ACCTGGAATG
TCTATAATCT GGCTTGGATC CTTTCTTATC GCTTTTGGTT CGCTCCTTGC TGCTTTTCCT
TTTAGTGGAC GAGCAAGGAT TGTCTAG
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| Protein sequence | MPELGNILLL LACLLSLTYL FLPLSSCRFI TTAIFFCVSA SMAILIYCHI TNDFSLENVY
YHSHTTKPLI YKICGVWGNK EGSMLLWTLV LVMYLLLMDI YIPSVIPVSP SVIPVSSSVI
PVPRHWDPDN LIANEYIKWQ CNKNWIPVSS TGMTPERTNG SKLKKISLIT HGLICFCFLL
FTLIESSPFT KMPGIETDGL GFNPILQDIG LAIHPPILYL GYLGFSVPFS LSIAGLILNT
EGNVWAKIVR PWVLISWSLL TLGISLGSWW AYRELGWGGF WFWDPVENVS LMPWLIAVAL
THLLLVVRNF NVLRNFAILL TLTTFILSVT GTFLVRSGIL TSVHTFADDP RYGLYILALL
GVITVSSLVI FVVFTRKNHT PAMSFQCLTL ESRKKLATQV TEGRRFFSRF TMILMNNLLF
ITAFFIVFVG TLYPTVLEYL TGELISVGAP YYNSLFNSIA LAILVLTMIG QYCSWQGNSL
LPIFREYRFS FCSAAAILPF IFHMELIIVL SITISIALLI FVLEAYSKRI RLFKVAFGES
ILLARRVSKS YYAMMLAHAG VAILVLGIAY SVGWQEKKEN YLKIGDSITV NKFKVTLRNI
ELIKEKNFHA VRGTMDIRNL LNNKILGEVT PEYRFYLAEG QKNVESSIYH NLLSDIYVVI
GEIDKSKSKI AAKVHYKPGM SIIWLGSFLI AFGSLLAAFP FSGRARIV
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