| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD0223 |
|---|
| Symbol | |
|---|
| ID | 2738337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002978 |
|---|
| Strand | - |
|---|
| Start bp | 202533 |
|---|
| End bp | 207257 |
|---|
| Gene Length | 4725 bp |
|---|
| Protein Length | 1574 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637172445 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_966033 |
|---|
| Protein GI | 42520118 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02697] Wolbachia palindromic element (WPE) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTATAG ATCATAATGT TGACACTGAG TCTTTATTTA AGTTAGCTGA TCAAGAAAAT
CAGCAAGATA AAGAAAAAAT TAAAAAATTT ATTAAGTATT TTTATAGTTT TGTTTATAAA
AGCGACCTAA AAGCCAATGA TAAGTTTTTG CTATATATTG TAAACGATGC TTACAATTTT
GTTTCTCAAA AAGAGAAAGA TGAAAGTAAG TTAGTAGTAA GCAATATAGA TGATATACCA
GGAATAGAAG GCGATTTTAC CACGATTAAG ATAACAAACG ATGATATGCC ATTTTTGGTT
GACTCCGTTA TTGCAACTAT TAAGTCGCAC GATTTAACCA TATGCTATTA CAGCAACAGC
ATAATTAACA TTAAAAGAAA AGATGGCCTA ATAGACGAGA TTTACTCTTT GGAAGAAAGC
AATGGAGTCA AAGAGTCAGT CATATATGTA ATTATCAAAG GTATAAGTGA CAGCTTTGTT
GATACATTAA AAGAATCTCT ACAGAAAACG CTGAAAGCGG TTAATTGCGT TGTGAAAGAT
TGGCACTTAA TGCTCAAGAA ACTTGATGAG GCAAGTCTTT CTGTCATCCC AGCTGGGATC
CAGGAAAAGG ACACGTGGAT TCCAGTGTCA CGCACTGGAA TGACACCAGA CCGAAATCAA
GAGCAAAAAG ATTTTCTAGT TTGGTTAAAG AATAATAACT TCGTATTTCT AGGTTATCAA
GAATATATTG CTGGTAAAGA TGAAAAACTC GTCTGTGACA GCAAAAAGGA CCTTGGCCTG
ATGAGAGTAG GTCAAAGTAC GTTGATTCCT TCTGCAAACC TTGATTCCCT ATACATATTG
AGATCAGATC TAATCTCAAT AGTCCATCGG CATACATACA TGAATTGTAT AGGAGTAAAA
GAATTTGATG ACCAGGGTAA TGTGGTAAAG GAACGGCGTT TTTTCGGGCT ATTTACTTCT
GTAGCGGAGG TCCAAGATAT TAGAACTATT CCAATAATAA GAGATAAAGT TAAAGTTATA
GAAAAAAATG CAGGGTTTGT AACCGGGGGC CACAATAACA AAGCTTTGAT TTCTATTTTG
CAAGTGTTCT CTTGTGATGA ATTATTCCAA TCAAATGAAG ACGAATTATT TAAAATTTGC
ATTTCGATCA TGTCTCTTGC GATTAGGCCA AGGGTCAGAT TATTTTTAAG AAGAGTCGGG
GATTTTATTA GTTGCATAGT GCTGATACCG ATGCATTATG CTAGCGCTAG GCTAATGTTC
AAGATACGTG ACATATTGAA GGATGAGACA AGTGCAGGAA GTTCAGATAT TTATAACAAT
CACATTATCA ATGAATATGA TTTGATGAAA TTGCATGTAG TGCTAAAGAC CAAAAATGCT
AGCGTTCTTG ATGATGAAGT TTTGCGTATC GAAAACAAAT TAAGAAACAT TACAGAAAAG
TGGGAAGATC GTTTTATAGA CAATTTATAC AATACTTTTA GCACTGTTGA GGATATATTC
ATCCGTTATT GCAAGGCATT TCCAATAAGC TATCAAGAGA GTTTCGAACC TCATGACGCA
TATTACGATA TGAAAAAATT GGAGATAGTG AGGAAGAAAG GAGTTAGCGA GGTCGATTTA
AGACTTACTC GTGATAATCT TAATTATCAA TTAAAGGTTT ATACTCCAAA CAATGGAGGC
CTTGAATTAT CGAAGATATT AAGGATCACT AAGAATTTGG GAGCTAAAAT TCTATCTCAT
AATGGCTATT ACATAGAAAT TAACGGTGGA ATATGGATAC ACCATTTTGT GTTGTCAAGA
GTCGATGAAT TAATAGACAA CATTACTCTA AAAGAGCAAT TTGAAATAAC ACTTGCGAAA
GTGTTTAGCA AGGAAATTAA AAATGACTAT TTCAATAGTT TGATCATTAT TGCTGGGCTC
AAGTGGAAAG AAGTGCTTCT GGTTAGAGCG TTAAGTGCTT ACCTAAAGCA GACGTCATTT
AACTACAATC CAGAATATAT CCAAAAGGTA GTCTCAGAGC ATCCAAAAAT AGTAAAGTAT
TTGATACAAC TATTTCATGC AAGATTTGAT CCTAACATAG ACATTGATAG AGCAGAAACT
ACGGACATTG TCAGAGAAAA AATTGAGGAA CTTCTAAAAG AGATCAGCAA TGTTTCACAT
GATTGCGTTT TGCGCTCGAT ATTTAACTTG ATAATGGCTA TTTTAAGGAC CAGTTATTAT
CAAGACGATA AACCATATTT ATCTACAAAA TTTGACTCAA GTAAAATAAA TGGTTTACCT
GATCCTCGTC CGTATCGTGA ATTGTATATT TATTCAAACC TTTTTGAGGG AATACATCTA
AGAGGAGGGA AATTAGCCCG TGGTGGCTTA AGGTGGTCGG ATAGGACGGA AGATTTTCGC
ACTGAAGTTT TGGGGCTCAT GAAAGCTCAG ATGACAAAAA ATGCGGTTAT TGTCCCTGTT
GGTGCAAAGG GTGGGTTTGT AATAAAGCAA GCTTATAAAG ATAAGAATAT TTTAAGAGAG
AAAAGTGTTG AGTGCTATAA GAGTTTTATC AGAGGAATGC TTGATATTAC TGATAACGTG
GTTGATGGTA AAATAATTCC ACCAGGGAAT GTGATTAGGT ATGATGAAGA TGATCCATAT
CTCGTGGTTG CTGCTGATAA AGGAACTGCT TCATTTTCTG ATTATGCCAA CCAGATAGCC
TCTGAATATA ACTTTTGGCT TGGCGATGCA TTTGCATCTG GTGGATCAGT AGGTTACGAC
CATAAGAAAA TGGGTATTAC AGCAAGAGGT GCATGGATTG CAGCACAGAG GCATTTTTGG
AAAATGAATA AGGATATTTA CCAGAATGCA ACTGTTATTG GAATTGGGGA TATGGCTGGC
GATCTATTTG GAAACGGTAT GCTGCTTTCA AAAAATATAC ATTTAATCGG CGCATTTAAC
CATATGCATA TTTTTATTGA TCCAAATCCT GATGCAGAAA AGAGTTTCAC AGAACGTAAA
CGTCTCTTTA AGTTACCATT TTCAACCTGG ATGGATTATA ACAAAGATTT GATCTCTCAG
GGTGGCAGGG TATTTGAGCG TAGCAGCAAG CAAGTAAATC TTTCTCAAGA AATGAAAAAA
TGCTTTGACA TAACGGAAGA TACGTTATCT CCAAGTGATT TGATTAGATA TCTACTCAAA
GCAGAAGTGG ACTTCATATG GAACGGAGGA ATCGGCACGT TTGTTAAGGC AAAGAGTGAA
AGTCATAGCA TGGTCGGTGA CAAAGCAAAC GATGAATTAA GAGTAAACGG TAAGGATATT
AGAGCTTCTA TGTTTATAGA GGGTGGAAAT CTTGGTTGTA CACAGCTTGG GAGAATAGAA
TATGCTGAAA GAGGTGGATA TATCAATGCA GATTTTGTTG ATAATTCAGC CGGAGTGATA
TGTTCGGACC TTGAAGTTAA CATTAAGATT GCATTTGTTT CAGCTATGAA AGCAGGGGGT
ATTTCTTTAG AAAAAAGGAA TGAAATACTG GCAAGTATGG TGGATGAAGT TGCATCCAAG
GTGCTTGAGA ACCACAACAG AATTGAAACA AAAGCATTAC TTCTTGAGTG TTTGCAAGCT
AAAGAGAGAT TGGAGCAGGA CCACAGGTTA CTGCTCAGTT TAGAAAAATC TGGGCTGTTA
AACCGAAGCG TAGAATTTCT TCCAACTGAC GAAGAGGTAG CAAGGATGTT AACCGGTGCA
GAAGGTTTCA GTTCTCCTCA GCTTTCTATT CTAATATCTT ATGCTAGAAC AGCAATAAAA
AATAAAATTA TACATTCCGA TCTGCCTGAA AAAGATCTTA TATCTAATGA CTACTTGCTA
GGTTATTTTC CTAAAAAGAT GTCAACAGAG TTTAAGGATT TCATATTAAA ACACCAACTT
CGTAGAGAAA TTATCTCCAC TTGCATTGCA AATGATGTTG TAAATAGGAT GGGCTGTATA
TTTATTAATA ATTTAGTTGA GAATACTGGA ATTAAGGTAC ACGAAGCAGT TAACATATAT
ATCGTTGTTA ACCACCTATA TGATTTAAAT AACCTGTGGC AGAAAATTGA TGAATTGGAT
GGAAAAATTG ATATTAACTC ATACTTGCAA ATAGTGAGAA ATGTGCAGAA ATTTATTGGC
AGAGTATCGT TTTGGTTAGT AAAAAATCTT AGCTTTGTAG AATTGGATGA TGTTACAAAA
TTTAAAGATG CAATTGAAAC TTTAGGCCAT GATGTTTTAG ATGAACACCT GTTAAAGGTC
TATAATCATG GATACACTTC TTTAGTGGAA CTTAATATAG ATAAAGATCT AGCAAAAAAA
ATTGCTGACC TGTGCGTTCT TACTTATGCA CTGGATATTA TATCTGTTGC TGAACAGACA
TCTTTGTCCA TTCTTGATGC TGGTAAAATA TACTTTGAGT TAAAGTCGCT GTTAAGATTC
GATCTGATTA GGACAATTGC CATCAAGATG AAAAGCAGCT CTTCTTATTG GGATCGCAGC
TTAGTTAATG ATTTATTGGA CGATTTAAGC AATTACCATC ACAAGCTAGC TGTTAAAGTC
ATAAAAGCTA CTGATAACCC TGAAGATAAG GTTCAAACCT GGGCTTGTAA TGATAAGGAC
TACATAGAAC GTTATAATAG TTTTTTAGAT GAGATGGTTG CTTCTAAACT TGATTTAAGC
AAATTAATAT TTATAATCAG AAGGATTAAA TTACTTGCTT CATAG
|
|---|
| Protein sequence | MCIDHNVDTE SLFKLADQEN QQDKEKIKKF IKYFYSFVYK SDLKANDKFL LYIVNDAYNF
VSQKEKDESK LVVSNIDDIP GIEGDFTTIK ITNDDMPFLV DSVIATIKSH DLTICYYSNS
IINIKRKDGL IDEIYSLEES NGVKESVIYV IIKGISDSFV DTLKESLQKT LKAVNCVVKD
WHLMLKKLDE ASLSVIPAGI QEKDTWIPVS RTGMTPDRNQ EQKDFLVWLK NNNFVFLGYQ
EYIAGKDEKL VCDSKKDLGL MRVGQSTLIP SANLDSLYIL RSDLISIVHR HTYMNCIGVK
EFDDQGNVVK ERRFFGLFTS VAEVQDIRTI PIIRDKVKVI EKNAGFVTGG HNNKALISIL
QVFSCDELFQ SNEDELFKIC ISIMSLAIRP RVRLFLRRVG DFISCIVLIP MHYASARLMF
KIRDILKDET SAGSSDIYNN HIINEYDLMK LHVVLKTKNA SVLDDEVLRI ENKLRNITEK
WEDRFIDNLY NTFSTVEDIF IRYCKAFPIS YQESFEPHDA YYDMKKLEIV RKKGVSEVDL
RLTRDNLNYQ LKVYTPNNGG LELSKILRIT KNLGAKILSH NGYYIEINGG IWIHHFVLSR
VDELIDNITL KEQFEITLAK VFSKEIKNDY FNSLIIIAGL KWKEVLLVRA LSAYLKQTSF
NYNPEYIQKV VSEHPKIVKY LIQLFHARFD PNIDIDRAET TDIVREKIEE LLKEISNVSH
DCVLRSIFNL IMAILRTSYY QDDKPYLSTK FDSSKINGLP DPRPYRELYI YSNLFEGIHL
RGGKLARGGL RWSDRTEDFR TEVLGLMKAQ MTKNAVIVPV GAKGGFVIKQ AYKDKNILRE
KSVECYKSFI RGMLDITDNV VDGKIIPPGN VIRYDEDDPY LVVAADKGTA SFSDYANQIA
SEYNFWLGDA FASGGSVGYD HKKMGITARG AWIAAQRHFW KMNKDIYQNA TVIGIGDMAG
DLFGNGMLLS KNIHLIGAFN HMHIFIDPNP DAEKSFTERK RLFKLPFSTW MDYNKDLISQ
GGRVFERSSK QVNLSQEMKK CFDITEDTLS PSDLIRYLLK AEVDFIWNGG IGTFVKAKSE
SHSMVGDKAN DELRVNGKDI RASMFIEGGN LGCTQLGRIE YAERGGYINA DFVDNSAGVI
CSDLEVNIKI AFVSAMKAGG ISLEKRNEIL ASMVDEVASK VLENHNRIET KALLLECLQA
KERLEQDHRL LLSLEKSGLL NRSVEFLPTD EEVARMLTGA EGFSSPQLSI LISYARTAIK
NKIIHSDLPE KDLISNDYLL GYFPKKMSTE FKDFILKHQL RREIISTCIA NDVVNRMGCI
FINNLVENTG IKVHEAVNIY IVVNHLYDLN NLWQKIDELD GKIDINSYLQ IVRNVQKFIG
RVSFWLVKNL SFVELDDVTK FKDAIETLGH DVLDEHLLKV YNHGYTSLVE LNIDKDLAKK
IADLCVLTYA LDIISVAEQT SLSILDAGKI YFELKSLLRF DLIRTIAIKM KSSSSYWDRS
LVNDLLDDLS NYHHKLAVKV IKATDNPEDK VQTWACNDKD YIERYNSFLD EMVASKLDLS
KLIFIIRRIK LLAS
|
|---|
| |