| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD0038 |
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| Symbol | tolB |
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| ID | 2738394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002978 |
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| Strand | - |
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| Start bp | 40152 |
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| End bp | 41414 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 637172276 |
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| Product | translocation protein TolB |
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| Protein accession | NP_965870 |
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| Protein GI | 42519955 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0823662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTAT TCGTTCATCT GGTGTTATTT ATTTCGTTAT TTATTCCTTA TTTTACAAAA
GCTGCTTTAT ATGTTGATAT AAAAAAAAGC AGTGTTGGTA ACATTGGTCT TGTTGTATCT
AAATGTACAT GTAAAACAGC GTTGGAAAGC GAATTAAGCG AAAATATTGC AAAGGTAATA
GGAACAAATT TATCTAATTG TGGCTTATTT AATGTAAAAC GTAGCGCGGA AGCTGAATCT
AAATCTTGGA AAAGCGATAC TGTAGTCACA GTAAGTTTAA GCGAAATATC TGGTAGTGCA
TTAGAGCTAT CATTTCGTTT ATTTGACGCT TTTACAAAAA GAGAATTACT TACTCAGTCA
GTTGTTTTTC CAGCAAAAGA CTGGAGAAAA ATTGGTCACC TCGTTTCGGA TGTGATACAT
GATAGATTAA TTGGTGAGAA AGGGCACTTC AACACAAAAA TCACGTATAT CGCTGAAGAA
AAAGATAGCA ACTACAAATC TGTGCGTAAA ATTGCTGTGA TGAATCAAGA TGGAAGTAAT
ATAAAATACT TAACAAATGG CGATAGATTT GTGTCAACAC CGAGATTCTC ACCAAATGGA
AAGGGTATTG TTTACATCTC GTACGCAAAT GGTAAAAGTT ATATAATATT AAAAAATTTA
AAAGATAACA CTGAATCAAT AATCAGCGCA TTTGAAGGAG TTGTTTCTGC ACCAAGATTT
TCTCCCGATG GTAAATCTCT TTTAATTTCC CACTCATTGG GTGGTGAAAC GAATATATTA
TCTTTGGATT TAAGTAGTAA ACGAACAAAA AAAATTACTA AAGGTTCAGC TATAAGCACT
TCTCCCTCTT TTTCTCCAGA TCAAAAGTAT ATGGCTTTTA GTTCTGATAT AAGTGGGAGT
CAGCAACTGT ACGTTATCGA TTTTACTAAC AAAAGTAAAA AACCTAAAAG AATTAGTTTT
GGAAGTGGAA GATATGCTAC GCCTGTTTGG TCGCCAAAAG GAGATCTGAT AGCTTTTACA
AAGATTCAGT CAGGAAAATT TTACATAGGA GTTATGAAGC CAGATGGCAA AGAAGAACGT
CTGCTTTCAG AGGGGCATAA AATTGAATCC CCGGCATGGT TACCAAATGG TAGAGAAATC
ATTTTTACAA GAACAGAATC ACCAAGCAAC TCTAAACTAT ATTTAGTAGA CTTAGTAAAG
AAAAATCAAA AAATGGTTTC CACTCCCACA AATGCTTCTT TACCGGATTG GTCTTATTTT
TGA
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| Protein sequence | MKLFVHLVLF ISLFIPYFTK AALYVDIKKS SVGNIGLVVS KCTCKTALES ELSENIAKVI
GTNLSNCGLF NVKRSAEAES KSWKSDTVVT VSLSEISGSA LELSFRLFDA FTKRELLTQS
VVFPAKDWRK IGHLVSDVIH DRLIGEKGHF NTKITYIAEE KDSNYKSVRK IAVMNQDGSN
IKYLTNGDRF VSTPRFSPNG KGIVYISYAN GKSYIILKNL KDNTESIISA FEGVVSAPRF
SPDGKSLLIS HSLGGETNIL SLDLSSKRTK KITKGSAIST SPSFSPDQKY MAFSSDISGS
QQLYVIDFTN KSKKPKRISF GSGRYATPVW SPKGDLIAFT KIQSGKFYIG VMKPDGKEER
LLSEGHKIES PAWLPNGREI IFTRTESPSN SKLYLVDLVK KNQKMVSTPT NASLPDWSYF
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