Gene WD0021 details

Gene Information

• Locus tag: WD0021
• Symbol: rplA
• ID: 2738842
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Wolbachia endosymbiont of Drosophila melanogaster
• Kingdom: Bacteria
• Replicon accession: NC_002978
• Strand: +
• Start bp: 19022
• End bp: 19675
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 637172260
• Product: 50S ribosomal protein L1
• Protein accession: NP_965854
• Protein GI: 42519939
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0081] Ribosomal protein L1
• TIGRFAM ID: [TIGR01169] ribosomal protein L1, bacterial/chloroplast

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0508427
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATACAT ATAATGATAA TCCTAAGCAG TGTTTGAAGA AGATTGTTGA GTCTGCTTCA 
GCAAAATTTA ATGAATCAGT TGATATTGCG GTCAATTTAG GCGTAGATTC ACGTAAATCT 
GAAGAGCAGG TACGTGGTAC AGTAGTTTTG CCTAAAGGTA TCGGGAAGAA TATTAAAGTA 
GCTGTTTTCG CTCAAGATAA ACATTTATTA GAAGCTGAAA AAGCTGGTGC TGATATTGCA 
GGAGGAGAGG ATTTAGTTGA AGAAATAAAA AAAGGTAGAA AGTTAGATGT TGATTGGTGC 
ATTACTACTC CTGATTTTAT GGCAAAAATC ACTCCTATTG CAAAAGTATT GGGTGTTAAA 
GGGCTGATGC CTAACCCTAA ATTTGGTACT GTGACTTCTA ACATTGCAGA AGCTATTAAA 
ACCATTAAGT CTGGTCAGGT AAAATTTGGA ACAGATAAAA ATGGTGTTAT TCATGGTAAA 
TTAGGAAATA TTAAATTTGA TATTGATGAC TTGCTAGAAA ATTTAAAAGC CTTTCTTAAA 
GTAATTAAAG ATAATAAACC TATTTCTGCG AAAGGAATTT ACTTTAAGGG TGTTTTTTTA 
AATTCAACTA TGGGTAAAGC TTATAAGATA GGCAAAGTGG AAGATATAAT TTAA 

 

Protein sequence

MNTYNDNPKQ CLKKIVESAS AKFNESVDIA VNLGVDSRKS EEQVRGTVVL PKGIGKNIKV 
AVFAQDKHLL EAEKAGADIA GGEDLVEEIK KGRKLDVDWC ITTPDFMAKI TPIAKVLGVK 
GLMPNPKFGT VTSNIAEAIK TIKSGQVKFG TDKNGVIHGK LGNIKFDIDD LLENLKAFLK 
VIKDNKPISA KGIYFKGVFL NSTMGKAYKI GKVEDII