| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | WD0008 |
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| Symbol | |
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| ID | 2738688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Wolbachia endosymbiont of Drosophila melanogaster |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002978 |
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| Strand | + |
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| Start bp | 8269 |
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| End bp | 10215 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 637172247 |
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| Product | type IV secretion system component VirD4 |
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| Protein accession | NP_965842 |
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| Protein GI | 42519927 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.325178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAATA GAAATCACCT ACGTAATATT CTCATAGGAG GTGTAGTAGC TTTTAGCGTA
CTTGAGTTTT GCTTCTATCT ATCTGGTATA TTGTTTGTTC TGTTTGCTGA TGGTCCGGAT
GCTGTGGATT TTAAGGCAAT TAATCCTAGT TTGACGCCTT TCCCTCAAGC TCTTTGGCCA
ACGATTTTTA ATCATATACA ATATTGTTGG CATCATCCAG AGTTATATAG CCTTGAGCTC
AAAATCACAT TAATTATATC TTCTGCACTG CCTATCATTG TTTTAATGAT TATCTTATGG
AATTTAAGAG AAAGGATAAT TGAGTGGCGA CCATTTAAAA AGAAGGAATC ACTTCATGGA
GATTCGCAGT GGGCATCAGA GAAAGACATA CGAAAAGCAG GATTAAGAAG CAAAAAGGGA
TTATTGCTTG GTAAAGATAA AAGAGGATAC TTCATTTCTG ATAGGTTTCA GCATGCATTG
TTATTTGCAC CTACAGGTTC TGGTAAGGGT GTTGGCTTTG TAATTCCTAA TTTATTATTT
TGGACTGACT CGGTAATTGT ACACGACATA AAATTAGAAA ACTATGAAAT AACAAGTGGT
TGGCGAGAAC GACAAGGACA AAAAGTATAC GTATGGAATC CAGCGCAGCC AGATGGAATA
AGTCACTGTT ACAATCCATT ACAATGGATT AGTGAAAAAC CTGGGCAGAT GGTTGACGAT
GTGCAGAAAA TAGCTAACCT AATCATGCCT GAACAAGACT TTTGGCAGAA TGAAGCAAGA
AGCTTATTTG TTGGAGTGGT ATTATACTTA CTTGCTGCAC CAGAGAAAGT TAAATCTTTT
GGTGAAGTTG TGCGTACGAT GCGTAGTGAT GACGTGGTTT ATAATCTTGC TGTTGCTCTT
GATACAATGG GTAAAATACT ACACCCTGTA GCATATATGA ATATTGCAGC TTTTTTACAA
AAAGCTGATA AAGAAAGGTC AGGTGTTGTA TCAACCATGA ACTCATCACT TGAATTGTGG
GTAAACCCAT TGATTGATAC TGCAACTGCG TCAAGTGATT TTAATATTCT AGATTTTAAA
AAGAAGAAAA TTACAGTTTA TGTTGGTTTA ACTCCTGACA ACTTGACTAG GCTCAGGCCT
TTAATGCAGG TTTTTTACCA ACAGGCAACT GAGTTTTTAT GTAGAAAATT GCCATCGGAT
GACGAGCCTT ATGGCGTATT GTTTTTAATG GATGAGTTTC CTACACTTGG AAAAATGGAG
CAATTTCAAA CAGGTATTGC ATATTTTCGT GGTTATCGAG TTAGGTTATT CTTAATTGTT
CAAGATACTG AGCAGCTCAA AGGAATATAC GAAGAAGCAG GGATGAACTC CTTTTTGTCA
AACTCGACTT ACAGAATAAC TTTTGCAGCC AATAATATTG AAACAGCTAA TTTAATATCG
CAACTTATAG GAAACAAAAC TGTACAACAA GAATCGTTGA ATAAGCCTAA ATTTTTAGAT
TTAAATCCTG CTTCAAGGTC ATTACATATC TCTGAAATAC AGAGAGCATT GCTATTGCCT
CAAGAAGTTA TTATGTTGCC ACGTGACGAT CAGATAATTT TAATAGAGTC GACTTACCCA
ATTAAATCAA AGAAAATTTT GTACTACAGT GATACCACCT TCACAAGAAG GCTGCTCAAA
CAAACTCGTG TGCCTACACA AGAACCATAT GACCCAAATA AAGTTCTTTC TGCCGCTGCG
AGCAAAGATA AGGTTAATAA CGAGGGGAAT AATGTTCTTG AGGGACCTAA TTCAGTTGAT
TATCCTGCTG AAACTAAAAC CGAAGATGCA GTATATGATG AATCAGATGA ATTTGCAGAC
GAAGATATTG ATGATGAAGA TATCGACGAT AAGTTTGAAG ATGATGACGA GGAAGATGAG
GATAAATTAA AAAATGACGA GAAGTAA
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| Protein sequence | MSNRNHLRNI LIGGVVAFSV LEFCFYLSGI LFVLFADGPD AVDFKAINPS LTPFPQALWP
TIFNHIQYCW HHPELYSLEL KITLIISSAL PIIVLMIILW NLRERIIEWR PFKKKESLHG
DSQWASEKDI RKAGLRSKKG LLLGKDKRGY FISDRFQHAL LFAPTGSGKG VGFVIPNLLF
WTDSVIVHDI KLENYEITSG WRERQGQKVY VWNPAQPDGI SHCYNPLQWI SEKPGQMVDD
VQKIANLIMP EQDFWQNEAR SLFVGVVLYL LAAPEKVKSF GEVVRTMRSD DVVYNLAVAL
DTMGKILHPV AYMNIAAFLQ KADKERSGVV STMNSSLELW VNPLIDTATA SSDFNILDFK
KKKITVYVGL TPDNLTRLRP LMQVFYQQAT EFLCRKLPSD DEPYGVLFLM DEFPTLGKME
QFQTGIAYFR GYRVRLFLIV QDTEQLKGIY EEAGMNSFLS NSTYRITFAA NNIETANLIS
QLIGNKTVQQ ESLNKPKFLD LNPASRSLHI SEIQRALLLP QEVIMLPRDD QIILIESTYP
IKSKKILYYS DTTFTRRLLK QTRVPTQEPY DPNKVLSAAA SKDKVNNEGN NVLEGPNSVD
YPAETKTEDA VYDESDEFAD EDIDDEDIDD KFEDDDEEDE DKLKNDEK
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