Gene MCA3071 details

Gene Information

• Locus tag: MCA3071
• ID: 3104551
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 3255041
• End bp: 3256063
• Gene Length: 1023 bp
• Protein Length: 340 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637172197
• Product: isocitrate dehydrogenase, NAD-dependent, putative
• Protein accession: YP_115458
• Protein GI: 53802809
• COG category: [C] Energy production and conversion; [E] Amino acid transport and metabolism
• COG ID: [COG0473] Isocitrate/isopropylmalate dehydrogenase
• TIGRFAM ID: [TIGR00175] isocitrate dehydrogenase, NAD-dependent, mitochondrial type; [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type; [TIGR02088] isopropylmalate/isohomocitrate dehydrogenases

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAAGA TCACCCTCAT CCCCGGCGAC GGTATCGGCC CCTCCATCGT CGACGCCGCC 
GTCAAGGTCA TCGAGGCCAC CGGCGTCCAG GTCCAATGGG ACACCCAATC CGCCGGCATG 
GCGGCGGTCG AGAAATTCGG TACCCCGTTG CCGGACGCCA CGCTGGATTC CATCCGCGCC 
AACCGCATCT GCTTCAAGGG ACCGCTCACC ACTCCCGTCG GCGGAGGTTA CCGCAGCGTC 
AACGTCACCC TGCGCCAAGC CTTCAACCTC TATGCCAACG TCCGTCCGGC CATCTCCTTC 
GAGGGCACCG ACACCGCCTT CAGCGACGTC AACCTCGTCA CCGTCCGCGA GAACACCGAA 
GGCTTGTACG CCGGCATCGA GCATTTCATC AAGGTCGACG AGGAAAAGAT CGCGGCGGAA 
AGCATCGCGG TCGTCACCCG CAAGGGCTCT GAGCGCATCA TCCGCTATGC CTTCGACTAT 
GCCCGCCGCG CCCGGCGCAA GAAGGTCACC CTGGTGCACA AGGCCAACAT CCTCAAGTGC 
ACCTCCGGCC TGTTCCTGGA AATCGGTCGC GAAATCGCCA AGGAATATCC GGACATCGAA 
TTCGACGACC GTATCGTCGA TGCCTGCTCA ATGCAGATGG TCATGCAGCC TCAGCGCTTC 
GACGTGCTGG TCACCACCAA TCTGTTCGGC GATATCCTGT CGGACCTGGC GGCCGGCCTG 
ATCGGCGGCC TCGGGCTCAC GGCGGGCGCC AACATCGGCA CCGACGCGGC GCTGTTCGAA 
GCCGTGCACG GCAGCGCGCC GGACATCGCC GACAAAGGCA TCGCCAATCC CACCGCCATG 
ATCATGGCCG GCGCCATGAT GCTCGAACAC ATCGGCGAAC CGGACGCCGC GCGCAGGATC 
GAACGCGCGG TGCGCGAGGT GATCGAGGAC GGCCGCTCGG TCACGCCGGA CCTGGCCAAG 
GACTCCCCCT GCGGCACCGC ACAGATGGCC GAAGCCATCG TCGAGCGGGT GCGTCAGGCG 
TAG 

 

Protein sequence

MHKITLIPGD GIGPSIVDAA VKVIEATGVQ VQWDTQSAGM AAVEKFGTPL PDATLDSIRA 
NRICFKGPLT TPVGGGYRSV NVTLRQAFNL YANVRPAISF EGTDTAFSDV NLVTVRENTE 
GLYAGIEHFI KVDEEKIAAE SIAVVTRKGS ERIIRYAFDY ARRARRKKVT LVHKANILKC 
TSGLFLEIGR EIAKEYPDIE FDDRIVDACS MQMVMQPQRF DVLVTTNLFG DILSDLAAGL 
IGGLGLTAGA NIGTDAALFE AVHGSAPDIA DKGIANPTAM IMAGAMMLEH IGEPDAARRI 
ERAVREVIED GRSVTPDLAK DSPCGTAQMA EAIVERVRQA