Gene MCA3060 details

Gene Information

• Locus tag: MCA3060
• Symbol: hemC
• ID: 3103942
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 3244910
• End bp: 3245965
• Gene Length: 1056 bp
• Protein Length: 351 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637172186
• Product: porphobilinogen deaminase
• Protein accession: YP_115447
• Protein GI: 53802806
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0181] Porphobilinogen deaminase
• TIGRFAM ID: [TIGR00212] porphobilinogen deaminase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGAAC GCCGAACGCT GAGCGGACCA CCGCCCCACG GAACGCCGGT ACCAGGATTT 
CGGCCCGGCA AATCGCGATC TGTTAAAATG CGCGGATCGT CTTTTCCAGG TTTTCCTTCG 
ACCGTGGCCA GTCACACCCT CCGCATAGCG ACCCGCAAGA GCCCACTGGC TTTGTGGCAG 
GCAGAATACG TCGCATCCCG TCTTCGGGCA GCCCACCCCG ACCTCCGGGT CGAACTGGTC 
GGGATGACCA CCCGGGGCGA CAAACTGCTC GATGCTCCAC TCGCGAAAGT GGGCGGCAAG 
GGGTTGTTCG TGAAGGAGCT GGAACAGGGC CTGCTCGAGG GCAGGGCCGA CATCGCCGTC 
CATTCCATGA AGGACGTGCC AGTCGAATTC CCCGAAGGGC TCCATCTCGC CGCCATCCTG 
GAACGCGAAG ACCCGCGTGA CGCTCTGGTC TCCCACCGTT ACCGGAGCTT CGCGGAGTTG 
CCGGCCGATG CCCGCATCGG CACCTCCAGC CTGCGGCGCC AGTGCCAGAT CAAATGCCGC 
CTCCCCGGCT GCTCCCTGTA CGATCTGCGC GGCAACGTCA ACACCCGGCT CGCCAAACTG 
GACGCGGGTG AGTTCGACGC CATCGTGCTC GCCTCTGCCG GCCTGAAACG GCTCGGCTTC 
CAGGAACGTA TCGCCGAAAC ACTGACACCG GAACAATGCC TCCCGGCCAT CGGTCAAGGG 
GCGATCGGCG TGGAGTGCCG GAGCACCGAT ACCCGGACCA ACGCCCTGCT GGTGCCGCTG 
CACCATCCGC CCACGGCGTG GTGCGTCCTG GCCGAACGCG CCATGAACCG ACGCCTCGAC 
GGCGGCTGCC AGGTTCCGAT CGCCGGTTTC GCCCAGCTCG AAGGCGACAC CCTGAGCCTG 
CGCGGACTGG TCGGCAACCC GGACGGCTCG GGCATCATCC GCGCCGAAGC CGTCGGTCAC 
CCGTCCACCT TCGAGGCACT GGGAAAGCGG GTCGCCGAGC ATCTGCTCGA CCAGGGCGCC 
GACGAAATAC TCCGGCGCGT TTACGCCACA CCCTGA 

 

Protein sequence

MVERRTLSGP PPHGTPVPGF RPGKSRSVKM RGSSFPGFPS TVASHTLRIA TRKSPLALWQ 
AEYVASRLRA AHPDLRVELV GMTTRGDKLL DAPLAKVGGK GLFVKELEQG LLEGRADIAV 
HSMKDVPVEF PEGLHLAAIL EREDPRDALV SHRYRSFAEL PADARIGTSS LRRQCQIKCR 
LPGCSLYDLR GNVNTRLAKL DAGEFDAIVL ASAGLKRLGF QERIAETLTP EQCLPAIGQG 
AIGVECRSTD TRTNALLVPL HHPPTAWCVL AERAMNRRLD GGCQVPIAGF AQLEGDTLSL 
RGLVGNPDGS GIIRAEAVGH PSTFEALGKR VAEHLLDQGA DEILRRVYAT P