Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA3037 |
Symbol | |
ID | 3103721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 3221994 |
End bp | 3223631 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637172163 |
Product | inner membrane protein, 60 kDa |
Protein accession | YP_115424 |
Protein GI | 53802852 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATAACC TACGGTTTGT GCTTTTCGTC TTTTTCATAT TCCTGAGCTT CCTGCTATGG GAGCAGTGGC AGATCGACTA CGGCCCGAAG CCCCAAGCCG TGGCCCAGAC CGACGGCGCC TCCCGCCCGG CAGGCGATCT GCCGCAACGG CCCAGCGACG ACGAGAGCGA CGTAACGGTG CACACCGAAG CACCGACGCA GGAAGGCAGT CGGCGCATCC GGGTCCACAC CGACGTCCTC AGCCTCGAAA TCGACACCCG CGGTGGCGAC CTGCGCCAAC TCGACCTGCT CAACTACCCC GTCAGCAAGG AGCAGCCGGA CCGGCCCGTG CGCCTCCTGA CCGACCAGGG CGACATCTTC GTCGCCCAGA GCGGCTTCAT CGGTGCCGCC CAGCAGGTCC CCAACCATCA CAGCCTCTGG CAGGCCGAAG CCGGCGAGTA CCGCCTACAA GATGGCCAGG ACATCCTACG CGTACCCCTC ACCTGGAGCG ACGGCCAGGG CGTGACGGTG ACCAAGACAT ACATCCTCCG GCGCGGCAGC TATCTGATCG ACATGGAACA GACGATCGAC AACCGCTCGA ACACCAACTG GACGGGCCGC CAGTACATGC AACTCCAGCG CAAGGAACCA ACCAGTGCGC AGGAAGACTC TCAATTCATC CGTACCTACA CCGGCGGTGT CCTGCACACT GAGGACAAAA GCTACGAGAA GATAGCCTTC AAGGACATGG CGAGCGGCAA CCTGGACGCG AAATCCCGCC AAGGCTGGAT CGCCATGATC CAGCATTACT TCCTCGCCGC CTGGGTTCCT CCCGCGGAAG ACGAATCGAC CTTCTACACC AAGGCGCTGG CCGACCGCGT TTTCGTGATC GGCGCCTACT CGCCCCCGGC CGAGGTCCCG GCAGGCAGCA GCCAGACACT CAAAGCCCGG CTGTTCGCCG GCCCCAAGCT GCAGCACGTG CTGGAAGGCA TTGCCCCCGG CCTCGAGCTG ACCGCCGACT TCGGCATCCT GACCGTCATC GCCAAGCCCA TCTACTGGCT GCTGGAAACA TTCCACGGCT TTTTCAACAA CTGGGGCTGG GCCATCATTT TCGTGACCCT GGTCATCAAG GCGCTGTTCT TCAAGCTCTC CGAAGCCAGC TACCGTTCCA TGGCCAACAT GCGGAAGCTG CAACCCAAGC TGGTGGAATT GAAGGAGCGC TATGGCGAGG ACCGCCAGCG CTACAACCAG GCGATGATGG AACTCTACCG CAAGGAGAAG GTCAACCCAC TCGGCGGCTG CCTCCCGATC CTGGTTCAGA TCCCGGTATT CATCTCGCTG TACTGGGTGC TGGTCGAAAG CGTGGATCTG CGCCAAGCGC CGTTCCTGCT CTGGCTGGAC GATCTTTCGT CCAAAGACCC GTACTTCGTC CTGCCGCTCA TCATGGGTGT TTCCATGTTC ATCCAGCAGC GCCTGAACCC GCCGCCTACC GACCCGATCC AGGCACGGGT GATGCAGTTC TTTCCACTGG TCTTCACGGT GTTCTTCCTC TTCTTCCCCT CGGGGCTAGT GCTGTACTGG GTGGTCAACA ACATTCTCTC GATCATCCAA CAGTGGTACA TCACCCGCCA GATCGAGAAA AACACCGCCA GGGCCTAG
|
Protein sequence | MDNLRFVLFV FFIFLSFLLW EQWQIDYGPK PQAVAQTDGA SRPAGDLPQR PSDDESDVTV HTEAPTQEGS RRIRVHTDVL SLEIDTRGGD LRQLDLLNYP VSKEQPDRPV RLLTDQGDIF VAQSGFIGAA QQVPNHHSLW QAEAGEYRLQ DGQDILRVPL TWSDGQGVTV TKTYILRRGS YLIDMEQTID NRSNTNWTGR QYMQLQRKEP TSAQEDSQFI RTYTGGVLHT EDKSYEKIAF KDMASGNLDA KSRQGWIAMI QHYFLAAWVP PAEDESTFYT KALADRVFVI GAYSPPAEVP AGSSQTLKAR LFAGPKLQHV LEGIAPGLEL TADFGILTVI AKPIYWLLET FHGFFNNWGW AIIFVTLVIK ALFFKLSEAS YRSMANMRKL QPKLVELKER YGEDRQRYNQ AMMELYRKEK VNPLGGCLPI LVQIPVFISL YWVLVESVDL RQAPFLLWLD DLSSKDPYFV LPLIMGVSMF IQQRLNPPPT DPIQARVMQF FPLVFTVFFL FFPSGLVLYW VVNNILSIIQ QWYITRQIEK NTARA
|
| |