Gene MCA3037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA3037 
Symbol 
ID3103721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp3221994 
End bp3223631 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content61% 
IMG OID637172163 
Productinner membrane protein, 60 kDa 
Protein accessionYP_115424 
Protein GI53802852 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAACC TACGGTTTGT GCTTTTCGTC TTTTTCATAT TCCTGAGCTT CCTGCTATGG 
GAGCAGTGGC AGATCGACTA CGGCCCGAAG CCCCAAGCCG TGGCCCAGAC CGACGGCGCC
TCCCGCCCGG CAGGCGATCT GCCGCAACGG CCCAGCGACG ACGAGAGCGA CGTAACGGTG
CACACCGAAG CACCGACGCA GGAAGGCAGT CGGCGCATCC GGGTCCACAC CGACGTCCTC
AGCCTCGAAA TCGACACCCG CGGTGGCGAC CTGCGCCAAC TCGACCTGCT CAACTACCCC
GTCAGCAAGG AGCAGCCGGA CCGGCCCGTG CGCCTCCTGA CCGACCAGGG CGACATCTTC
GTCGCCCAGA GCGGCTTCAT CGGTGCCGCC CAGCAGGTCC CCAACCATCA CAGCCTCTGG
CAGGCCGAAG CCGGCGAGTA CCGCCTACAA GATGGCCAGG ACATCCTACG CGTACCCCTC
ACCTGGAGCG ACGGCCAGGG CGTGACGGTG ACCAAGACAT ACATCCTCCG GCGCGGCAGC
TATCTGATCG ACATGGAACA GACGATCGAC AACCGCTCGA ACACCAACTG GACGGGCCGC
CAGTACATGC AACTCCAGCG CAAGGAACCA ACCAGTGCGC AGGAAGACTC TCAATTCATC
CGTACCTACA CCGGCGGTGT CCTGCACACT GAGGACAAAA GCTACGAGAA GATAGCCTTC
AAGGACATGG CGAGCGGCAA CCTGGACGCG AAATCCCGCC AAGGCTGGAT CGCCATGATC
CAGCATTACT TCCTCGCCGC CTGGGTTCCT CCCGCGGAAG ACGAATCGAC CTTCTACACC
AAGGCGCTGG CCGACCGCGT TTTCGTGATC GGCGCCTACT CGCCCCCGGC CGAGGTCCCG
GCAGGCAGCA GCCAGACACT CAAAGCCCGG CTGTTCGCCG GCCCCAAGCT GCAGCACGTG
CTGGAAGGCA TTGCCCCCGG CCTCGAGCTG ACCGCCGACT TCGGCATCCT GACCGTCATC
GCCAAGCCCA TCTACTGGCT GCTGGAAACA TTCCACGGCT TTTTCAACAA CTGGGGCTGG
GCCATCATTT TCGTGACCCT GGTCATCAAG GCGCTGTTCT TCAAGCTCTC CGAAGCCAGC
TACCGTTCCA TGGCCAACAT GCGGAAGCTG CAACCCAAGC TGGTGGAATT GAAGGAGCGC
TATGGCGAGG ACCGCCAGCG CTACAACCAG GCGATGATGG AACTCTACCG CAAGGAGAAG
GTCAACCCAC TCGGCGGCTG CCTCCCGATC CTGGTTCAGA TCCCGGTATT CATCTCGCTG
TACTGGGTGC TGGTCGAAAG CGTGGATCTG CGCCAAGCGC CGTTCCTGCT CTGGCTGGAC
GATCTTTCGT CCAAAGACCC GTACTTCGTC CTGCCGCTCA TCATGGGTGT TTCCATGTTC
ATCCAGCAGC GCCTGAACCC GCCGCCTACC GACCCGATCC AGGCACGGGT GATGCAGTTC
TTTCCACTGG TCTTCACGGT GTTCTTCCTC TTCTTCCCCT CGGGGCTAGT GCTGTACTGG
GTGGTCAACA ACATTCTCTC GATCATCCAA CAGTGGTACA TCACCCGCCA GATCGAGAAA
AACACCGCCA GGGCCTAG
 
Protein sequence
MDNLRFVLFV FFIFLSFLLW EQWQIDYGPK PQAVAQTDGA SRPAGDLPQR PSDDESDVTV 
HTEAPTQEGS RRIRVHTDVL SLEIDTRGGD LRQLDLLNYP VSKEQPDRPV RLLTDQGDIF
VAQSGFIGAA QQVPNHHSLW QAEAGEYRLQ DGQDILRVPL TWSDGQGVTV TKTYILRRGS
YLIDMEQTID NRSNTNWTGR QYMQLQRKEP TSAQEDSQFI RTYTGGVLHT EDKSYEKIAF
KDMASGNLDA KSRQGWIAMI QHYFLAAWVP PAEDESTFYT KALADRVFVI GAYSPPAEVP
AGSSQTLKAR LFAGPKLQHV LEGIAPGLEL TADFGILTVI AKPIYWLLET FHGFFNNWGW
AIIFVTLVIK ALFFKLSEAS YRSMANMRKL QPKLVELKER YGEDRQRYNQ AMMELYRKEK
VNPLGGCLPI LVQIPVFISL YWVLVESVDL RQAPFLLWLD DLSSKDPYFV LPLIMGVSMF
IQQRLNPPPT DPIQARVMQF FPLVFTVFFL FFPSGLVLYW VVNNILSIIQ QWYITRQIEK
NTARA