Gene MCA3021 details

Gene Information

• Locus tag: MCA3021
• Symbol: atpC-2
• ID: 3102870
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 3206445
• End bp: 3206894
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637172147
• Product: ATP synthase F1, epsilon subunit
• Protein accession: YP_115408
• Protein GI: 53802883
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGACAGA CCGCATCCCG TCTGCTAACG GTCGAGATCG TCGACGTCTG CCGGGAGATA 
TTTTCCGGGC GTTGTAGCCG GGTGGTCGCG CCAGCGGCAG ACGGTGAGGT CGGCGTTCTG 
CCCCGTCATA CGCCGTTCCT GACCCGGCTC CGGCCCGGCG AGATAAGGCT CAGGACCGAG 
GCAGGCGAAG ACCAGTATTT CTACCTCTCC GGGGGCTACA TGGAGGTGCA GCGCTGGGAG 
GTCAGCATCC TGGCCGACCA GGTGCTCCGC TCCCAAGAGA TCGACCGGGA AGCGGCCCTG 
GCGGCCAAGC GCAACGCAGA GCGGATGCTC CGCGAGAACC GGATTCCCGG CGAGCGTGAC 
CGAGCCTATC TGGAATTGCT CAAGGCCCTG GCCCAGTTGC GCCTGCTGGA ACGGCTGAAT 
GCTCGAAAAA TGGGCCGGAA CCGGCTCTGA 

 

Protein sequence

MGQTASRLLT VEIVDVCREI FSGRCSRVVA PAADGEVGVL PRHTPFLTRL RPGEIRLRTE 
AGEDQYFYLS GGYMEVQRWE VSILADQVLR SQEIDREAAL AAKRNAERML RENRIPGERD 
RAYLELLKAL AQLRLLERLN ARKMGRNRL