| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA3002 |
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| Symbol | lpdA |
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| ID | 3103740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 3177706 |
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| End bp | 3179127 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637172128 |
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| Product | pyruvate dehydrogenase complex, E3 component, dihydrolipoamide dehydrogenase |
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| Protein accession | YP_115390 |
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| Protein GI | 53802925 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAC CCAAGACGAT ACACGCCGAT GTCCTGGTGC TGGGCGGTGG GCCTGGCGGC
TACACCGCGG CTTTCCGCGC GGCGGATCTG GGCAGGCAGG TGGTCCTGGT CGAACGCTAC
CCGACCCTGG GGGGCGTCTG TCTCAATGTC GGCTGCATCC CCTCCAAGGC TTTGCTGCAC
GTCGCCCAGA TCATTCACGA GGCACGGGAA GCCGGCGAGT TCGGCCTCCG GTTCGGCGCG
CCCGAGATCG ATCTGGACCA GATCCGTGGC TTCAAGGACA AGGTGGTCAA GACTTTGACC
GGAGGGCTCG AGACCCTCGC CAGGCAGCGC AAGGTGACCG TGGTCCAGGG CACCGGCCGC
TTCACCGGCG AGCACGGCAT GCAGGTGGAA ACGACCGACG GGCCGGTCAC GGTCGGCTTC
GACCATGCCA TCATCGCCGC AGGCTCCCGG GCGGTGAAGA TTCCAGACTT CCCTCACGAC
GATCCGCGCC TGATGGATTC GACCGACGCC CTGGCGCTGC AGGAAGTCCC CAAGCGCCTC
CTGATCGTTG GCGGCGGCAT CATCGGCCTG GAAATGGCCA CGGTGTATCA CGCCCTGGGT
GCCGGTATCA CCGTGGTGGA ACTGATGGAC CAGCTGATCC CGGGCTGCGA TGCCGATCTG
GTGCGCCCGC TGCACCAGCA CATCAAGAAG CAGTACGAGA ACATCTATCT CAAGACCCGC
GTCAGCCGGA TCGAACCCGA AGCCGCCGGC CTCAAGGTGT TCTTCGAAGG GGAGGGCGCG
CCCGAGTCCG ATCTGTTCGA CCGCGTGCTG GTCGCGGTGG GGCGCGCCCC GAATGGCGCC
CTGATCGGGG CGGAAAATGC CGGTGTCCAC GTCGATGCCA AAGGCTTCAT CCCCGTCGAC
GAGCACCAGC GCACCAACGT CCCTCATATC TACGCCATCG GCGACATCGT CGGCAACCCC
ATGCTGGCCC ACAAGGCCAC CCACGAGGCC AAGGTCGCCG CCGAAGTCAT CGCCGGCAAA
CCGTCCGCCT TCCAGGCATT GACCATCCCA TCGGTGGCCT ATACCGATCC GGAAGTGGCC
TGGATGGGTG TCACCGAAGC CCAGGCCAAA GCCCAGGGCA TCGAATACGA AAAAGCCGTG
TTCCCGTGGG CCGCGAGCGG TCGCGCCCTG GGCATCGGCC GCAAGGAGGG CGCCACCAAG
CTGCTCTGCG ACAAGACCAC CAAACGGGTG ATCGGTGCCG GCATCGTCGG CCCCCATGCC
GGCGAGCTCA TCGCCGAAGC CGTGCTGGCC ATGGAAATGG GCGCCGATGC GGAAGACATC
GGCCTCACCG TCCATGCCCA CCCGACCTTG TCGGAAACCT TCGCCTTCGC CGCGGAAATG
ATCGAAGGCA CGATCACCGA TCTCTATATC CGCAAGCGCT GA
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| Protein sequence | MAEPKTIHAD VLVLGGGPGG YTAAFRAADL GRQVVLVERY PTLGGVCLNV GCIPSKALLH
VAQIIHEARE AGEFGLRFGA PEIDLDQIRG FKDKVVKTLT GGLETLARQR KVTVVQGTGR
FTGEHGMQVE TTDGPVTVGF DHAIIAAGSR AVKIPDFPHD DPRLMDSTDA LALQEVPKRL
LIVGGGIIGL EMATVYHALG AGITVVELMD QLIPGCDADL VRPLHQHIKK QYENIYLKTR
VSRIEPEAAG LKVFFEGEGA PESDLFDRVL VAVGRAPNGA LIGAENAGVH VDAKGFIPVD
EHQRTNVPHI YAIGDIVGNP MLAHKATHEA KVAAEVIAGK PSAFQALTIP SVAYTDPEVA
WMGVTEAQAK AQGIEYEKAV FPWAASGRAL GIGRKEGATK LLCDKTTKRV IGAGIVGPHA
GELIAEAVLA MEMGADAEDI GLTVHAHPTL SETFAFAAEM IEGTITDLYI RKR
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