Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA3001 |
Symbol | aceF |
ID | 3103554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 3176376 |
End bp | 3177686 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637172127 |
Product | branched-chain alpha-keto acid dehydrogenase subunit E2 |
Protein accession | YP_115389 |
Protein GI | 53802926 |
COG category | [C] Energy production and conversion |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.188631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCCAAG AACAAACCGT CGTCGTCCCC GATATCGGCG ACTTCAAGGA CGTCGAGATC ATCGAGGTAC TGGTCAAGCC TGGCGACAAG GTCGCGGCGA ACGACTCGCT GATCACCCTG GAGAGCGACA AGGCGGCGAT GGAGATTCCT TCGCCCTATT CCGGCACCGT CACCGAACTG CATGTGCGCG TCGGCAGCAA AGTCAGCATG GGGACGCCCA TTCTGCAGCT GCGGGAGGAC GAGGGCACGG ACGCCTCTGG GGCGGCTTCC GCCCCGGTAG AACCGGCGCC GGCCGAGCCT GTTTCCCCGC CACCGGCCGC AGCCGCCCCG GCTGCGGGCG ACACCCAGGC AGTCCCTGCG TCGGCGCCCA CACCTCCTGC GCCGATGCCG GTCGCCGAGG AAGGCTCGGG ACCGGCCCAC GCCAGCCCCG CCGTACGTCG CTTCGCCCGC GAACTCGGCG TGGACGTGGC GAAAGTCCGC GGCACCGGCC CGAAAGGCCG CATCCTGAAA ACGGACGTCC AGTCTTTCGT GAAACAAGCC GTCGCGACAG CAGAACGGAC GGGCGGCGGC GGTTTCGCCG TGCCGGCGAT GCCAGAGATC GATTTCGCCC AGTTCGGCCC GATCGAACGC CAGCCGCTGT CGCGAATCCA GAAGCTCTCT TCCGCCAACC TCCACCGCAC CTGGCTCACC GTCCCCCACG TCACCCAGCA TGACGAGGCC GACATCACCG AGCTGGAAGC CTTCCGAAAT GCGCTCAAGG CCGAATCCGC CAAGCGCGGC GTCAAACTGA CCCTCCTGCC ATTCATCATC AAGGCTGCGG TCGCTGCGCT GAAGGACTTC CCGCGCTTCA ACGCGTCAGT CGCTCCCAAT GGCGAGGAGC TGATCCTGAA GCGCTACTAC CACGTGGGTT TTGCGGTGGA CACGCCGGAC GGCCTGGTGG TGCCGGTGAT CCGCGACGCC GACACCAAAG GTATCTGGGA CATCGCCGCC GAACTCGCCG CCATCGGCGA CAAAGCCCGC GGCAAGAAGC TGCGCACCGC CGATCTGCAG GGCGGCACCT TCACCGTCTC CAGCCTGGGA GGCATCGGCG GTATCGCCTT CACCCCGATC ATCAACGCCC CCGAGGTCGC CATCCTGGGT GTCTCCAAGG CGCAGTTGCG ACCGGTATTC CAAGACGGCC AGTTCGTCCC GCGGCTGATG CTGCCCTTGT CGCTGTCCTA CGATCACCGG GTGATCGACG GCGCCGACGG CGTCCGCTTC GTCACCCATG TCAGCAGCCT GCTCGCCGAC ATGCGGCGGG TCCTGCTCTA A
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Protein sequence | MAQEQTVVVP DIGDFKDVEI IEVLVKPGDK VAANDSLITL ESDKAAMEIP SPYSGTVTEL HVRVGSKVSM GTPILQLRED EGTDASGAAS APVEPAPAEP VSPPPAAAAP AAGDTQAVPA SAPTPPAPMP VAEEGSGPAH ASPAVRRFAR ELGVDVAKVR GTGPKGRILK TDVQSFVKQA VATAERTGGG GFAVPAMPEI DFAQFGPIER QPLSRIQKLS SANLHRTWLT VPHVTQHDEA DITELEAFRN ALKAESAKRG VKLTLLPFII KAAVAALKDF PRFNASVAPN GEELILKRYY HVGFAVDTPD GLVVPVIRDA DTKGIWDIAA ELAAIGDKAR GKKLRTADLQ GGTFTVSSLG GIGGIAFTPI INAPEVAILG VSKAQLRPVF QDGQFVPRLM LPLSLSYDHR VIDGADGVRF VTHVSSLLAD MRRVLL
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