Gene MCA2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2978 
Symbol 
ID3104585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp3153707 
End bp3154402 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content65% 
IMG OID637172103 
Productputative lipoprotein 
Protein accessionYP_115367 
Protein GI53802841 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGC TGGGCGATCA GTCCTTTGCC GCTGTGAAGC GTGACGTGCC GGTCGATCCG 
GACCGGCAGG CCAACGACTA CGTGCGCTGT GTCGCCGACG CAGTGACGCG CGAAGTCGGC
GGAAGCTGGG AGGTCGTGCT GTTCAGGCAG GACAGCCCCA ATGCCTTCGC CCTGCCCGGC
GGCAAGATCG GAGTCCATAC CGGCATGCTC CGTATCGCCC GCAACCAGGA TCAACTGGCG
ACGGTGCTGG CCCATGAGGT CGCCCACGTG CTTTCCCGTC ATGCCAACGA GCGCTTGTCC
CAGCAGGTCG CCGTCCAGCA GGGACTGAAT GCCATGCAAG CCTTGGCCGA TCCATCGTCT
TCTTCCGGCA AGACGCTGAT GGGGCTGCTG GGGCTCGGCG CGCAGTACGG GATTCTGATG
CCTTACAGCC GCACCCAGGA AAGCGAGGCG GATCTGCTCG GCCTGGATCT CATGGCGCGC
GCCGGCTTCG ATCCGCGCCA GAGCATCGAA CTATGGAACA ACATGGCAAA CTCAGGGGGC
GGCCAGCCGA TCGAATTTCT GTCCACCCAT CCTTCGCACG CCACCCGCAT GCAGGATCTG
GCAAAGCGGA TGCCCCGGGC GCTCGATTTA CAGCGCCAGG CGGCTGCACA AGGACACCGG
CCGCAGTGTG ACGGGATAAG GGCGGGAGGC GGTTGA
 
Protein sequence
MAMLGDQSFA AVKRDVPVDP DRQANDYVRC VADAVTREVG GSWEVVLFRQ DSPNAFALPG 
GKIGVHTGML RIARNQDQLA TVLAHEVAHV LSRHANERLS QQVAVQQGLN AMQALADPSS
SSGKTLMGLL GLGAQYGILM PYSRTQESEA DLLGLDLMAR AGFDPRQSIE LWNNMANSGG
GQPIEFLSTH PSHATRMQDL AKRMPRALDL QRQAAAQGHR PQCDGIRAGG G