Gene MCA2894 details

Gene Information

• Locus tag: MCA2894
• ID: 3103982
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 3085112
• End bp: 3085648
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637172022
• Product: electron transport complex protein RnfB
• Protein accession: YP_115287
• Protein GI: 53802986
• COG category: [C] Energy production and conversion
• COG ID: [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB
• TIGRFAM ID: [TIGR01944] electron transport complex, RnfABCDGE type, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGGCGT TTCTCGCGGT CTGCGTATTG TTCACCCTGT TCGGCGCCCT GCTGGGCTAT 
TCCTCGCGGC GCTTCAAGGT GGAGGGTGAT CCGCTGGCCG ACAAGATCGA CGCCCTGCTG 
CCGCAGACCC AGTGCGGCCA ATGCGGCTTC CCCGGCTGCC GCCCTTATGC CGAGGCCATC 
GCACGGGGCG AGGCGGACAT CAACCAGTGC CCGCCCGGCG GCGAGGACGG CGTCCAGGCG 
CTGGCCGATC TGCTCGGCGT CGAACCCAAG CCGCTGAACG ACGAACACGG CGCCGAGAAG 
CCGGAAAGCG TCGCCGTCAT CGACGAAACC AAGTGCATCG GCTGCACCCT TTGCATCCAG 
GCCTGCCCGG TGGATGCCAT CCTCGGCGCG GCCAAGCTGA TGCACACGGT CATCGCCTCC 
GAATGCACCG GCTGCGAATT GTGTATAGCG CCCTGCCCAG TCGATTGCAT AGCGATGGAG 
CCGGTCCGGG AGAATCTCGG CACCTGGCGC TGGCCCAAAC CCGACGGAAC CCGCTGA 

 

Protein sequence

MLAFLAVCVL FTLFGALLGY SSRRFKVEGD PLADKIDALL PQTQCGQCGF PGCRPYAEAI 
ARGEADINQC PPGGEDGVQA LADLLGVEPK PLNDEHGAEK PESVAVIDET KCIGCTLCIQ 
ACPVDAILGA AKLMHTVIAS ECTGCELCIA PCPVDCIAME PVRENLGTWR WPKPDGTR