Gene MCA2852 details

Gene Information

• Locus tag: MCA2852
• Symbol: typA
• ID: 3104330
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 3044672
• End bp: 3046492
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637171981
• Product: GTP-binding protein TypA
• Protein accession: YP_115246
• Protein GI: 53803064
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.011881
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAGAAA AATTACGCAA CATAGCGATC ATCGCCCACG TCGACCACGG AAAAACCACC 
TTGGTAGACA AGCTGCTCCA GCAAAGCGGC ACTTTCGCCG CTCACGAGCG GGTGGGCGAG 
CGCGTCATGG ACTCCAATGA CCTCGAGAAG GAGCGCGGCA TCACCATTCT GGCAAAAAAT 
ACCGCGATCA AGTGGCGGGA TTACCGTATC AATATCGTCG ACACGCCCGG CCACGCCGAT 
TTCGGAGGTG AGGTCGAGCG CGTGCTTTCC ATGGTCGACT CGGTGTTGCT GCTGGTCGAC 
GCCGTCGACG GCCCCATGCC ACAAACCCGC TTCGTCACCC AGAAAGCCTT CGCCATGGGG 
CTGCATCCCA TCGTGCTGAT CAACAAGATC GACCGGCCCG GCGCCCGCGC GGCCTGGGTG 
CTCGATCAGA CCTTCGATCT GTTCGACCGC CTTGGCGCCA CCGAGGCCCA GCTCGATTTC 
CCGGTGATCT ACTGCTCGGC CTTGAACGGG TATGCGGGGC TCAGCCCGGA TATCTCGGAA 
GGCACGCTTG AGCCGCTGTT CGAGGCCATC GTGAATCATG TCTCACCGCC CGACGTGGAC 
ACCGACGGTC CCTTTCAGAT GCAGGTCAGC AGCCTCGATT ACAATTCGTA TGTGGGAGTC 
ATTGGCATTG GAAGAATCAC CCGAGGCACC GTCAAGAGGA ATACCCCCGT CACACTGATC 
AAGCGCGATG GCAGGCAGAG CGCCGCACGC ATTCTCCAGG TTCTGGCGTT CCACGGTCTT 
GAGCGCATCG AAAGGGAAGA GGCGAACGCC GGCGATATCA TCGCTTTCAC CGGTATCGAG 
GGGCTCGAGA TTTCGGATAC GCTTTGCGCG GTCGGGTTTG CCGAACAGCT CCCCCCGCTC 
ACCGTGGACG AACCCACGGT GAGCATGACC TTTCAGGTGA ACAATTCGCC CTTCGCGGGA 
AGGGAAGGCA AGTTTTTGAC GTCCAGGCAG ATTCGGGACA GGCTGAACCG CGAATTGATC 
CACAACGTCG CACTGCGGGT GGAGGATACG GCCGACCCGG ACAAATTCAC GGTTTCCGGC 
CGAGGTGAAC TGCATCTTTC GATTTTGATC GAAAACATGC GGCGAGAGGG CTATGAATTG 
GCCGTTTCCA GACCTGAGGT CATCATTCGT GAAATCGACG GCGAACCTTG TGAGCCCTAT 
GAATTCGTGA CGATAGAAGT GGAGGAAACA CATCAGGGCG CCGTCATGGA AAAGCTCGGG 
GAGCGCAAGG GCGACCTCCG TAACATGGTG CCGGATGGGC AAGGACGCGT GCGTCTCGAA 
TACCTCATCC CCTCCCGCGG ACTCATCGGA TTTCAAACCG AATTCCTCAC CACTACGTCC 
GGCACCGGCC TGCTGTATCA CGTGTTCGAT CACTACGGAC CAATCAAGAG GGGCGCGATT 
GGGCAGAGGA CCAATGGGGC GCTGATTTCC AACACAACGG GTAAAGCGCT GGCGTTTTCC 
CTGTTCAACC TACAGGAACG CGGACGCCTG TTCGTCGAAC ACGGCGATGA AGTCTACGAG 
GGCATGGTCG TGGGCGTACA TACGCGGGGA AACGATCTGG TGGTCAACCC CACGAAAGCG 
AAACAGCTCA CCAACATCCG GGCAGCGGGC AGCGACGAAA ACATCCTTTT GACACCCGCG 
ATCAAATTCA CTCTCGAGCA GGCGATAGAA TTCATCGACG ACGATGAACT CGTGGAAGTG 
ACCCCTCAGA GCATTCGCAT CCGCAAGAAG CTCCTGCAGG AACACGAGCG CAAGAAGGCT 
TCGCGAACCG CCGAGGGCTG A 

 

Protein sequence

MVEKLRNIAI IAHVDHGKTT LVDKLLQQSG TFAAHERVGE RVMDSNDLEK ERGITILAKN 
TAIKWRDYRI NIVDTPGHAD FGGEVERVLS MVDSVLLLVD AVDGPMPQTR FVTQKAFAMG 
LHPIVLINKI DRPGARAAWV LDQTFDLFDR LGATEAQLDF PVIYCSALNG YAGLSPDISE 
GTLEPLFEAI VNHVSPPDVD TDGPFQMQVS SLDYNSYVGV IGIGRITRGT VKRNTPVTLI 
KRDGRQSAAR ILQVLAFHGL ERIEREEANA GDIIAFTGIE GLEISDTLCA VGFAEQLPPL 
TVDEPTVSMT FQVNNSPFAG REGKFLTSRQ IRDRLNRELI HNVALRVEDT ADPDKFTVSG 
RGELHLSILI ENMRREGYEL AVSRPEVIIR EIDGEPCEPY EFVTIEVEET HQGAVMEKLG 
ERKGDLRNMV PDGQGRVRLE YLIPSRGLIG FQTEFLTTTS GTGLLYHVFD HYGPIKRGAI 
GQRTNGALIS NTTGKALAFS LFNLQERGRL FVEHGDEVYE GMVVGVHTRG NDLVVNPTKA 
KQLTNIRAAG SDENILLTPA IKFTLEQAIE FIDDDELVEV TPQSIRIRKK LLQEHERKKA 
SRTAEG