| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2847 |
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| Symbol | |
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| ID | 3104522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 3038541 |
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| End bp | 3040745 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637171976 |
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| Product | nitrogen regulation protein NtrY, putative |
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| Protein accession | YP_115241 |
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| Protein GI | 53803076 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCATTC GCAAACTGAG AATCCGCCTG CCGCTCAGCC TGGTCGTGAT CACGTTGTTC
ACGGCCATCG TCGCTTCGCT GCACCTGATG AGTTCTGCCA CGCAGAGCTC GCCGCAGCTC
GGCAGCATGT ACTCGCTGCT GGTCCTCATC AATTCGGTCG GTTCGATCCT GTTACTGACG
CTGGTCGTCG TCAATGTGTA CGGACTCCTC CGCCAGCTCG CCAGACGCGC GGCCGGCTCC
CATCTGACGG CCCGCATGGC ATTTCTGTTC GTCCTGCTCA GCCTGGCACC GGCATCCATC
GTGTTCTATT ACTCCATGCA GTTTCTCAAA CAAAGCATCG ACAGTTGGTT CGACGTCCGC
ATCGATCAGG CCATGGAGGA CGCGCTGGAG CTGGGGCGGG CGGCAATCGA CGAGCGGATG
CGCACCATGC TGCACCAAAC CGAACAGGCG GCCGCCAAAT TGCAGCTCGC CCCGATCATG
GAATATCCCT TGCGCCTGAC CGAACTTCGG GACGAGCTGG GCGAAGGTGA GTTCACGGTG
TTTTCCCGGC AAGGGCGGAT CATCGCCGCC GGCGGCTCTC AGCTGGGCTT CATCCTCCCC
GACCTGCCGG ATACCGGGGT TCTGCTCCGG GTGAAACACG GCAAATCCTT TATCCGGCTG
GAACCCAACC CGGACGGCAA TCTGCAGATC CGCGCCGTCG TGGCCATCCC CTCCGACGAC
CCTCTGTTTC TGCAGGCCGT GTTCCCGGTA CCACTGCGCA TCTCCCAGCT GGCCAGCACG
GTCGAAGCGG CCTATGTTCA CTACAAGGAA CTCGGGTTCC TCCGCAGTTC CCTCAAGCAC
ACATTCATCC TCACGCTGTC GTTGGTGCTG CTGCTCAGCC TCCTGGCGGC CATCTGGGTC
GCATTCGTGA GCATCCGCCG CATCGTCGCA CCGGTGCGAC GGCTGGCCCA GGGGACGCGC
GCAGTCGCCG AAGGCCGCTA CGGCCAGCGC CTCGTAGTGC GGGCGAAAGA CGAACTCGGT
TTCCTGGTCG AGTCGTTCAA CACGATGACC GAAAAACTCG CCCAGGCCAG TGAGGAGGCC
CGAATGTCGC GGCTCGAAGT CGAGCGCCAG CGCGCCTATC TCGAAACCGT GCTGTCCAAC
CTCTCCTCGG GCGTACTCAG CTTCGACAAA GAATCCCGGC TTCTCACCGC GAACCACGCA
GTGGACGAGA TCCTGCACGT TCCCGCCCAC GACTACCTGG GTCTCCCGCT CTCCCGGCTC
AAAACCGACC ATCCCTATCT CACCGAAACG CTGGAACGTA TCGAGCGCTG GCTGGAAAAA
GGCACCGGTA ACTGGGAGGG GGAAATGTCC TTCGTCGGTC CCTCGGGTCG GCGAGAGCTC
TACTGCCATG GCACCCCCCT GTTCAATGGC AACGGCGATA AACTTGGCGC CGTGGTGGTA
TTCGAAGACG TGACGGCATT GATCCTCGCC CAGCGCCAGG CGGCTTGGAG CGAGGTCGCC
CGACGGCTGG CCCACGAAAT CAAAAATCCG CTCACCCCAA TCCAGCTCTC TGCCGAACGT
CTGCATCACA AGCTGGCCAG CCGGCTCGAC GAGCGCGACG CGGAAATCCT GGACCGTTCG
ACCCGCACCA TCGTGCATCA GGTCGAGGCA CTGAAAGCCA TGGTCAATGC CTTCGCCGAA
TACGCGAGAT CCTCGACCAT CCAGCTCCGG CGAGTCGCGC TGGCCGAAAT CGTGGAAGAA
GTGGTGGCGT TGTACCCGCC ACAATCCGGC ATGAGTTTCG AAATCGATGA AGAACCGAGC
CTGCCCAGGA TTTCGGGCGA TCCGCTGCAG CTGCGTCAAG TCCTGCACAA TCTCATCAAG
AATTCGCAGG AAGCCCTGAC GCCGTCCACA CAAGGTAAGA TGTGCTTTAT TCTTCGCAAG
ACGGTCGATC AGGGCGAGGC CTTCGTGCAA CTGACCGTCC GAGACAATGG CCCCGGCATT
CCGAAGGAGC AGGCGGATCG GATCTTCGAA CCCTATGTCA CCACCAAAAC CAAGGGCACC
GGGCTGGGAC TTGCGATCGT CAAAAAGATC ATCGAAGAAC ACGGCGGGAC CATCCGCGTG
GAAAACGGAC TCCGGCAGGG CGCCGGTTTC ATCATCCGGT TCCCCGTCCC AGAAACAGAC
CTTGGAGCCG GCGCAAATGG CGGGAACTCT GGAGGGAAAT CATGA
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| Protein sequence | MVIRKLRIRL PLSLVVITLF TAIVASLHLM SSATQSSPQL GSMYSLLVLI NSVGSILLLT
LVVVNVYGLL RQLARRAAGS HLTARMAFLF VLLSLAPASI VFYYSMQFLK QSIDSWFDVR
IDQAMEDALE LGRAAIDERM RTMLHQTEQA AAKLQLAPIM EYPLRLTELR DELGEGEFTV
FSRQGRIIAA GGSQLGFILP DLPDTGVLLR VKHGKSFIRL EPNPDGNLQI RAVVAIPSDD
PLFLQAVFPV PLRISQLAST VEAAYVHYKE LGFLRSSLKH TFILTLSLVL LLSLLAAIWV
AFVSIRRIVA PVRRLAQGTR AVAEGRYGQR LVVRAKDELG FLVESFNTMT EKLAQASEEA
RMSRLEVERQ RAYLETVLSN LSSGVLSFDK ESRLLTANHA VDEILHVPAH DYLGLPLSRL
KTDHPYLTET LERIERWLEK GTGNWEGEMS FVGPSGRREL YCHGTPLFNG NGDKLGAVVV
FEDVTALILA QRQAAWSEVA RRLAHEIKNP LTPIQLSAER LHHKLASRLD ERDAEILDRS
TRTIVHQVEA LKAMVNAFAE YARSSTIQLR RVALAEIVEE VVALYPPQSG MSFEIDEEPS
LPRISGDPLQ LRQVLHNLIK NSQEALTPST QGKMCFILRK TVDQGEAFVQ LTVRDNGPGI
PKEQADRIFE PYVTTKTKGT GLGLAIVKKI IEEHGGTIRV ENGLRQGAGF IIRFPVPETD
LGAGANGGNS GGKS
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