Gene MCA2843 details

Gene Information

• Locus tag: MCA2843
• Symbol: def-2
• ID: 3104053
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 3035164
• End bp: 3035700
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637171972
• Product: polypeptide deformylase
• Protein accession: YP_115237
• Protein GI: 53803080
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCATTC TATCCATTCT CGAATTTCCT GACGAACGTT TGCGCAAAAA GGCCGCACCG 
GTCGAAGTGT TCGACGACAC CCTGCGCCGG ACCGTCGACG ATATGTTCGA GACCATGTAT 
GCAGCGCCCG GCGTCGGCCT GGCAGCCACC CAGGTCAACG TGCACAAGCG CATCCTCGTC 
ATCGACGTTT CCGAGGAGAA AGATGCGCCG CTTTGCCTGA TCAACCCGGA GCTGCTCGAA 
AAACAGGGGA ACGGCGAGAT GGAGGAAGGC TGCCTGTCGG TGCCCGGGAT TTTCGAAAAA 
GTGCCCCGAG CCGAGTCGGT CCGCGTCCGC GCCCAGGACC GCAATGGCGA ATTCTTCGAA 
ATGTCGGCGG AGGGACTGTT GGCCGTCTGT ATCCAGCACG AGATGGATCA CCTGGAAGGC 
AAGCTGTTCC TGGACCATCT TTCCACCCTG AAGCGCCAGA TGGCACGCAA GAAACTCCAG 
AAAGAACGGC GCCTGAGGGA GATCAACAGG GCTCCGCGCA CTGCGGCAGC CGTCTGA 

 

Protein sequence

MTILSILEFP DERLRKKAAP VEVFDDTLRR TVDDMFETMY AAPGVGLAAT QVNVHKRILV 
IDVSEEKDAP LCLINPELLE KQGNGEMEEG CLSVPGIFEK VPRAESVRVR AQDRNGEFFE 
MSAEGLLAVC IQHEMDHLEG KLFLDHLSTL KRQMARKKLQ KERRLREINR APRTAAAV