Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2842 |
Symbol | |
ID | 3102637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 3033965 |
End bp | 3034990 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637171971 |
Product | LysM domain-containing protein |
Protein accession | YP_115236 |
Protein GI | 53803081 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCA AGGTCGCAGC CGGCTTGGCG CTGCTCTTCG CCTGCGCCGT GACACCGGCA GCCGAGATCG TTCTCAATCC GGACCATCCG GATCGCTACC TGGTGCAGGC GAACGACACG CTCTGGGACG TCGCTTCCCG CTTTCTGCAG AATCCGGCAC AGTGGTCCGA GGTGTGGTAC CGGAACCCGG TCTTGGGCAA CCCCGACCAG ATTTATCCGG GCGACGTGCT CGTGCTCCGC CAGGGGGCCG GCGGGCCACG GATCGAGCTC GAAACCGCCC CGACCGTCCC CTTGAGTCCC GTCATCCGGG TGACTCCGCT GGCGCGGGAG GTCCCGGTCA TTCCGGAGGA CGCCATCCGG GCCTTCCTGA CCCGGCCCAG GGTCTTGGAC AGCGCCGACG CCGACACCCT CCCTTACGTC GTCGGGTTTC CGGACGAGCA CATCTCCGGC GGCGCCGGTT ACGGCCTCTA TGCGCGAGGA GTCAGAGAGG CCAAGGGCAG CGTTTTGGCG GTCGTGCGGC CGGGTCCCGC CTATCGCGAT GGCGTCACTG AAGAGGTGCT CGGCTATGAA GCCTTGTATA TCGGGGACGC GCAGGTGCGC AGTGCCGGCG AGCCGGCGGA GCTTCTGCTG CTCCGTGCCG AGCGGGAGGT CGTGATCGGT GACCGCCTGC TGGCCGTCGA GCCGCAAGAG CTGACGACCT CGTACACGCT GCATGCTCCG GCGAAGCCGG TCGCCGGCCG GATCGTCGCT GTGCGCGATG GCGTGACCCA GATCGGGCAA TACCAGGTGA TCGTGCTGGA TCGGGGCGGC AGGGACGGCC TGGAGGTCGG GCACGTGCTC GACATCTACC GTGAAGCCGA TACGATCAAA GACTACGTCG CCGGCGGTTT CGGGAACGTG GTCGAGACGC CGCCGGATTG GTCGGGTTCG CTGGTGGTCT TCCGACCCTT CGAGCGCATC AGTTATGCGC TGGTCATGAA GGCCGTGAGG GCGATGCACA TCGGTGACAT CGTGAAATCT CCGTAA
|
Protein sequence | MTAKVAAGLA LLFACAVTPA AEIVLNPDHP DRYLVQANDT LWDVASRFLQ NPAQWSEVWY RNPVLGNPDQ IYPGDVLVLR QGAGGPRIEL ETAPTVPLSP VIRVTPLARE VPVIPEDAIR AFLTRPRVLD SADADTLPYV VGFPDEHISG GAGYGLYARG VREAKGSVLA VVRPGPAYRD GVTEEVLGYE ALYIGDAQVR SAGEPAELLL LRAEREVVIG DRLLAVEPQE LTTSYTLHAP AKPVAGRIVA VRDGVTQIGQ YQVIVLDRGG RDGLEVGHVL DIYREADTIK DYVAGGFGNV VETPPDWSGS LVVFRPFERI SYALVMKAVR AMHIGDIVKS P
|
| |