| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2788 |
|---|
| Symbol | |
|---|
| ID | 3103104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | - |
|---|
| Start bp | 2979599 |
|---|
| End bp | 2980597 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637171918 |
|---|
| Product | alcohol dehydrogenase, zinc-containing |
|---|
| Protein accession | YP_115183 |
|---|
| Protein GI | 53803055 |
|---|
| COG category | [C] Energy production and conversion
[R] General function prediction only |
|---|
| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.147926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCA TCGTCATGAC CCGCCCCGGC GAAGCCGCCG AGGTGCTGGA ACTGCGTGAC
CTGCCCGAAC CGGCGTTGAC GGCGCCGACC CAGATCAAGG TGCGGCTCCG GGCGGCGGGG
GTCAATCCCA TCGACACCAA GGTTCGCCGC CGCGGGCTGT TCTACGACGA TGCCCTGCCG
GCGGTTCTCG GCTGCGATGG GGCCGGCGAG GTGGTCGAAG CCGGGGCGGA GGTGGACCGC
TTTCGGATCG GCGACCGGGT CTGGTTTTGC AACGGCGGCC TCGGTGCCGA GCAGGGAAAC
TATGCCGAAT ATACCGTGCT GGATCAGCGC TGGGCAGCGC CCATGCCGGC ATCGAGCGCG
TTCGCCAGTG CGGCGGCCGG TCCGCTGGTC CTGATCACGG CCTGGGGTGC CTTGTACGAT
CGGGGACGGC TGCAGCCCGG CCAGACCGTG CTGGTCCATG CGGCCGCCGG CGGCGTCGGC
CATGTCGCCG TGCAGTTGGC CAAACTGCGC GGGGCGCGGG TCATCGCCAC CGTGGGTTCC
GAAGACAAGG CCGCGCTGGC CAGGGGCTGG GGCGCCGATG AGACCATCGA CTACCGGACT
CAGGATTTCG TCGCCGAGGT CAACGCTCTG ACCGGCGGGC GAGGCGCCGA TCTGGTGCTG
GATACGGTCG GTCCCGAGGT GTTTCGCCGC AGCGTCGAAT GCACAGCCCA TTTCGGCGAC
CTGGTGACCC TGCTCGACAC CGGCGCCACC TCCCTGGCCG AAGCGCGGAT GCGCAACTTG
AGGATCGGCT TCGAACTGAT GCTGGTGCCG ATGCTGCGCA AGCTGGACGC AGCGCGGGAC
CATCACGTGG AAATCCTCCG TGCCTGTGGT GAATGGATCG ATGACGGCAA GCTCGAACTG
TACGTGAGCG GTGTCCATCC GCTCGAGGAG GCCGCTCGGG TACACGACAT CATCGAAGCC
GGACATACCA CCGGCAAGCG GGTGCTCTGC ATCGATTGA
|
|---|
| Protein sequence | MKAIVMTRPG EAAEVLELRD LPEPALTAPT QIKVRLRAAG VNPIDTKVRR RGLFYDDALP
AVLGCDGAGE VVEAGAEVDR FRIGDRVWFC NGGLGAEQGN YAEYTVLDQR WAAPMPASSA
FASAAAGPLV LITAWGALYD RGRLQPGQTV LVHAAAGGVG HVAVQLAKLR GARVIATVGS
EDKAALARGW GADETIDYRT QDFVAEVNAL TGGRGADLVL DTVGPEVFRR SVECTAHFGD
LVTLLDTGAT SLAEARMRNL RIGFELMLVP MLRKLDAARD HHVEILRACG EWIDDGKLEL
YVSGVHPLEE AARVHDIIEA GHTTGKRVLC ID
|
|---|
| |