| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2750 |
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| Symbol | |
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| ID | 3104382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 2940093 |
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| End bp | 2941724 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637171883 |
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| Product | HAMP domain-containing protein |
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| Protein accession | YP_115148 |
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| Protein GI | 53803111 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.362683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGGAC TCCTGGTGAG CGGGGTTTTC ACGCTCACCG TGGTGGGACT GATCCTGCAG
AAGCAGTCGC TGGAGAGTGA ATTGGCCAAG CGCGTCGAGT TGATGCGGGC CAATCTGCTG
GAACGCGGGA CGGCGTTTTC CAAGCTCGTC GAAAACGAAG TCGAAAACGA CGTCGCGGCG
TTCAACTTCT CCCACATACA GGAAGTCCTG AGTCACTCCC CACAGCTGGA CTACGCGATC
CTCACCAACA CCGAAGGCGT CGCCTTCGTC CACACCCGCT CCCCCGATCT GCAGCAGGAA
AAACTCCAGG GCGAGGCCGA CCGTTACGCC CTGCGGCAGA CTGGCCTGAC CCACCGGGAA
TATCCGGACC AGAACGCCAT CGAATTCATC CTGCCCATCC ATTTCGGAGC CAAGCCGTGG
GGCGTGCTGC GGCTGGGGTT CTCGCTCGAA ACGCTGCGGC AGGAAATCGC CAACTCCAGG
GCGGAGATCG AAGCAGCGAC CCGGCGTGTC GTTCTGCTCG GCACCGGCAT CGCCGGCATT
TTCATAGTCA TTGGCTCGGG CATCGTCGTG CTGGTTTCCA ATGCACTGTC GCGTCCGCTG
ATCCGGCTGA CCCGCTCCGT GCGCGCCCTC GCGCGCGGCA ACTACGACGA CGCCGCCCAC
CTGCTGGAAA CCGAGCTGCC GCAGCGTATG GGACATGCGG CGCCCACCGA CGAGATCGGC
ATCCTCGCCG GTTCGTTCGT CCAGATGGCC GGCGAGATAC GCCGCTCCCA TGAACAGCTG
GAGGAATACA ACCGCACACT GGAAGATAAG GTCCGAGTCC GCACCGAGGA ACTGGTGGAG
GCCTATCGCA AGCAAAAGGA GCTGGAGAAC GAAATCCTGC AGGAATCCCT GCGGCTGGCG
CGGGACATCC AGATGGGCAT GATGTCCACG GCCTTCCCCC GCTTCGCCAA GGGCAGCCCC
GTGGACTTGT ACGCCATGGT CGACCCCGCG CGCGAGGTCG GTGGGGATTT CTACGATTTC
CTGTATTTGG ACGGCCGTAC CCTGCTGATC GCCATCGGCG ACGTCTCCGG CAAGGGGATG
GCCGCGGCCT TGTTCATGGT CAAGGTCAAG ACGATGATCC GGGCCGTCAC TTCCGCCCAC
GGCTCACCCC GCGAGATCCT GCAGGCTGTG AACCCCGAGC TATGCAGGGA AAACGACGTC
GGCATGTTCG TCACGGTATT CCTGGCCACC CTGGATGTGG AAACGGGTCG GCTGGTGTAC
AGCTATGGCG GCCACAACCG GCCGGTTCTG TTGGGGCGGG ACGGCAGCGT GGAGATGCTG
ACGGGCGACA CCGCCGTCGC CCTGGGCGTT TTCGACGACA TCGAGTTCAG CGAACAGGAA
CGGGTGCTGC AGCCGGGCGC CGCCCTGGTG ATGTATACCG ACGGAGTGAA CGAGGCCATG
AATGGCGAAA GCGAATTATT TGGCGATTCG CGCCTGCTGG CCGCGCTGCG AGGCAGGACA
CGCGAGGATG CCAGTGAACT CGTCGACGCG GTCATTTCTC GGGTGCGCGC CCACGCCGGC
ACCGCCGAGC AATCCGACGA CATCACACTG ATCGCAGTGC GCCGGGCTCC GTCTGCCGGC
GTGACCGTTT GA
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| Protein sequence | MLGLLVSGVF TLTVVGLILQ KQSLESELAK RVELMRANLL ERGTAFSKLV ENEVENDVAA
FNFSHIQEVL SHSPQLDYAI LTNTEGVAFV HTRSPDLQQE KLQGEADRYA LRQTGLTHRE
YPDQNAIEFI LPIHFGAKPW GVLRLGFSLE TLRQEIANSR AEIEAATRRV VLLGTGIAGI
FIVIGSGIVV LVSNALSRPL IRLTRSVRAL ARGNYDDAAH LLETELPQRM GHAAPTDEIG
ILAGSFVQMA GEIRRSHEQL EEYNRTLEDK VRVRTEELVE AYRKQKELEN EILQESLRLA
RDIQMGMMST AFPRFAKGSP VDLYAMVDPA REVGGDFYDF LYLDGRTLLI AIGDVSGKGM
AAALFMVKVK TMIRAVTSAH GSPREILQAV NPELCRENDV GMFVTVFLAT LDVETGRLVY
SYGGHNRPVL LGRDGSVEML TGDTAVALGV FDDIEFSEQE RVLQPGAALV MYTDGVNEAM
NGESELFGDS RLLAALRGRT REDASELVDA VISRVRAHAG TAEQSDDITL IAVRRAPSAG
VTV
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