Gene MCA2750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2750 
Symbol 
ID3104382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp2940093 
End bp2941724 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content63% 
IMG OID637171883 
ProductHAMP domain-containing protein 
Protein accessionYP_115148 
Protein GI53803111 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.362683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGGAC TCCTGGTGAG CGGGGTTTTC ACGCTCACCG TGGTGGGACT GATCCTGCAG 
AAGCAGTCGC TGGAGAGTGA ATTGGCCAAG CGCGTCGAGT TGATGCGGGC CAATCTGCTG
GAACGCGGGA CGGCGTTTTC CAAGCTCGTC GAAAACGAAG TCGAAAACGA CGTCGCGGCG
TTCAACTTCT CCCACATACA GGAAGTCCTG AGTCACTCCC CACAGCTGGA CTACGCGATC
CTCACCAACA CCGAAGGCGT CGCCTTCGTC CACACCCGCT CCCCCGATCT GCAGCAGGAA
AAACTCCAGG GCGAGGCCGA CCGTTACGCC CTGCGGCAGA CTGGCCTGAC CCACCGGGAA
TATCCGGACC AGAACGCCAT CGAATTCATC CTGCCCATCC ATTTCGGAGC CAAGCCGTGG
GGCGTGCTGC GGCTGGGGTT CTCGCTCGAA ACGCTGCGGC AGGAAATCGC CAACTCCAGG
GCGGAGATCG AAGCAGCGAC CCGGCGTGTC GTTCTGCTCG GCACCGGCAT CGCCGGCATT
TTCATAGTCA TTGGCTCGGG CATCGTCGTG CTGGTTTCCA ATGCACTGTC GCGTCCGCTG
ATCCGGCTGA CCCGCTCCGT GCGCGCCCTC GCGCGCGGCA ACTACGACGA CGCCGCCCAC
CTGCTGGAAA CCGAGCTGCC GCAGCGTATG GGACATGCGG CGCCCACCGA CGAGATCGGC
ATCCTCGCCG GTTCGTTCGT CCAGATGGCC GGCGAGATAC GCCGCTCCCA TGAACAGCTG
GAGGAATACA ACCGCACACT GGAAGATAAG GTCCGAGTCC GCACCGAGGA ACTGGTGGAG
GCCTATCGCA AGCAAAAGGA GCTGGAGAAC GAAATCCTGC AGGAATCCCT GCGGCTGGCG
CGGGACATCC AGATGGGCAT GATGTCCACG GCCTTCCCCC GCTTCGCCAA GGGCAGCCCC
GTGGACTTGT ACGCCATGGT CGACCCCGCG CGCGAGGTCG GTGGGGATTT CTACGATTTC
CTGTATTTGG ACGGCCGTAC CCTGCTGATC GCCATCGGCG ACGTCTCCGG CAAGGGGATG
GCCGCGGCCT TGTTCATGGT CAAGGTCAAG ACGATGATCC GGGCCGTCAC TTCCGCCCAC
GGCTCACCCC GCGAGATCCT GCAGGCTGTG AACCCCGAGC TATGCAGGGA AAACGACGTC
GGCATGTTCG TCACGGTATT CCTGGCCACC CTGGATGTGG AAACGGGTCG GCTGGTGTAC
AGCTATGGCG GCCACAACCG GCCGGTTCTG TTGGGGCGGG ACGGCAGCGT GGAGATGCTG
ACGGGCGACA CCGCCGTCGC CCTGGGCGTT TTCGACGACA TCGAGTTCAG CGAACAGGAA
CGGGTGCTGC AGCCGGGCGC CGCCCTGGTG ATGTATACCG ACGGAGTGAA CGAGGCCATG
AATGGCGAAA GCGAATTATT TGGCGATTCG CGCCTGCTGG CCGCGCTGCG AGGCAGGACA
CGCGAGGATG CCAGTGAACT CGTCGACGCG GTCATTTCTC GGGTGCGCGC CCACGCCGGC
ACCGCCGAGC AATCCGACGA CATCACACTG ATCGCAGTGC GCCGGGCTCC GTCTGCCGGC
GTGACCGTTT GA
 
Protein sequence
MLGLLVSGVF TLTVVGLILQ KQSLESELAK RVELMRANLL ERGTAFSKLV ENEVENDVAA 
FNFSHIQEVL SHSPQLDYAI LTNTEGVAFV HTRSPDLQQE KLQGEADRYA LRQTGLTHRE
YPDQNAIEFI LPIHFGAKPW GVLRLGFSLE TLRQEIANSR AEIEAATRRV VLLGTGIAGI
FIVIGSGIVV LVSNALSRPL IRLTRSVRAL ARGNYDDAAH LLETELPQRM GHAAPTDEIG
ILAGSFVQMA GEIRRSHEQL EEYNRTLEDK VRVRTEELVE AYRKQKELEN EILQESLRLA
RDIQMGMMST AFPRFAKGSP VDLYAMVDPA REVGGDFYDF LYLDGRTLLI AIGDVSGKGM
AAALFMVKVK TMIRAVTSAH GSPREILQAV NPELCRENDV GMFVTVFLAT LDVETGRLVY
SYGGHNRPVL LGRDGSVEML TGDTAVALGV FDDIEFSEQE RVLQPGAALV MYTDGVNEAM
NGESELFGDS RLLAALRGRT REDASELVDA VISRVRAHAG TAEQSDDITL IAVRRAPSAG
VTV