| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2743 |
|---|
| Symbol | rbcL |
|---|
| ID | 3104087 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2934677 |
|---|
| End bp | 2936098 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637171878 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_115143 |
|---|
| Protein GI | 53803124 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGTCA AAACATACAA CGCGGGCGTC AAGGAATACC GCGAAACCTA CTGGGACCCG
AACTACACTC CCGCCGACAC CGATCTGCTG GCGGTCTTCA AGATCACCCC TCAGCCGGGT
GTGCCGCGCG AAGAAGCCGC CGCCGCCGTG GCCGCGGAAT CGTCGACCGG CACCTGGACC
ACCGTCTGGA CCGACCTGCT GACCGACCTC GACTATTACA AGGGCCGCGC CTACCGGATC
GAGGACGTGC CCGGCCAGGA CGAACAGTTC TACGCCTTCA TCGCCTATCC CATCGACCTG
TTCGAGGAGG GCTCCGTCGT CAACGTGTTC ACCTCGCTGG TGGGCAACGT GTTCGGCTTC
AAGGCCGTGC GCGGCCTGCG CCTGGAAGAC GTGCGCTTCC CCCTCGCCTA CGTGATGACC
TGCGGCGGCC CGCCCCACGG CATCCAGGTG GAGCGCGACA TCATGAACAA GTACGGCCGT
CCGTTGCTCG GCTGCACCAT CAAGCCCAAG CTGGGCCTGT CGGCCAAGAA CTACGGCCGC
GCCGTGTACG AGTGCCTCAG AGGCGGCCTG GACTTCACCA AGGACGACGA GAACGTCAAC
AGCCAGCCGT TCATGCGCTG GCGCCAGCGC TTCGACTTCG TGATGGAGGC GATCGAGAAG
GCCGAGGCCG AAACCGGCGA GCGCAAGGGC CACTACCTCA ACGTGACCGC CCCGACTCCG
GAAGAGATGT ACAAACGTGC CGAGTACGCC AAGGAAATCG GCGCGCCCAT CATCATGCAC
GACTTCATCA CCGGGGGCTT CTGCGCCAAC ACGGGTCTCG CCAACTGGTG CCGCAACAAC
GGCATGCTGC TGCACATCCA CCGCGCCATG CACGCCGTGA TGGACCGCAA TCCCAACCAC
GGCATCCACT TCCGCGTCTT CACCAAGATG CTGCGCCTTT CTGGCGGCGA CCATCTGCAC
ACCGGCACCG TGGTCGGCAA GCTGGAAGGC GACCGCCAGG CCACCCTGGG GTGGATCGAC
CTGCTGCGCG AACGCAGCAT CAAGGAAGAC CGCAGCCGCG GCATCTTCTT CGACCAGGAA
TGGGGCGCCA TGCCCGGCGT GTTCGCGGTC GCCTCCGGCG GCATCCACGT CTGGCACATG
CCGGCACTGC TTTCGATCTT CGGCGACGAC GCGGTGTTCC AGTTCGGTGG CGGCACCCTG
GGCCATCCTT GGGGCAACGC GGCCGGCGCC GCTGCCAACC GCGTGGCGCT GGAAGCCTGC
GTGGAGGCCC GCAACGAAGG CCGCCAGCTC GAGAAGGAAG GCAAGGAAAT CCTGACCGAA
GCCGCCAAGA GCAGCCCGGA ACTCAAGGCC GCAATGGAGA CCTGGAAGGA AATCAAATTC
GAGTTCGACA CCGTCGACAA GCTCGACGTG GCCCACCGGT AA
|
|---|
| Protein sequence | MAVKTYNAGV KEYRETYWDP NYTPADTDLL AVFKITPQPG VPREEAAAAV AAESSTGTWT
TVWTDLLTDL DYYKGRAYRI EDVPGQDEQF YAFIAYPIDL FEEGSVVNVF TSLVGNVFGF
KAVRGLRLED VRFPLAYVMT CGGPPHGIQV ERDIMNKYGR PLLGCTIKPK LGLSAKNYGR
AVYECLRGGL DFTKDDENVN SQPFMRWRQR FDFVMEAIEK AEAETGERKG HYLNVTAPTP
EEMYKRAEYA KEIGAPIIMH DFITGGFCAN TGLANWCRNN GMLLHIHRAM HAVMDRNPNH
GIHFRVFTKM LRLSGGDHLH TGTVVGKLEG DRQATLGWID LLRERSIKED RSRGIFFDQE
WGAMPGVFAV ASGGIHVWHM PALLSIFGDD AVFQFGGGTL GHPWGNAAGA AANRVALEAC
VEARNEGRQL EKEGKEILTE AAKSSPELKA AMETWKEIKF EFDTVDKLDV AHR
|
|---|
| |