| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2735 |
|---|
| Symbol | |
|---|
| ID | 3103388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2926250 |
|---|
| End bp | 2927731 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637171870 |
|---|
| Product | transporter, putative |
|---|
| Protein accession | YP_115135 |
|---|
| Protein GI | 53803139 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.482614 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCGC TCCCCCTGTT CCGACTGCGC CATTGGCGTG AGCTTCCCCC GATGCGCCTG
CTGTTTACCA TTCTGGCGGC ATGCGCCCTT TTCGTCGGCG TGCCGGAGCT TTGTCTCGCG
GGCGAACACG GTCCAGTGGG CCCCTTGGAC CTGACCCGGC ATTGGGCCGG CTATCTTGCC
GTGCTGATTT TCTTCCTCGC CTATTTCCTC GCCATGGCCG AGGAGGTGAC GGAACTACGG
AAGTCCAAGC CGATGGTGTT CGCCGCCAGC GTGATCTGGG GCCTGATCGC GGCGGTTTAT
GTGGGCGGCG GAATGCCGGA GCAGGCTGGC ATGGCGTTCC GCGCCTCACT GCTGACCTAT
GCGGAACTCT TGCTGTTCAT CCTGGTGTCG ATGACCTACC TCAACGCCAT GGAAGATCTC
GACGTGTTCG AGGCTCTGGG CTGCTGGCTG CTGGGGAGGG GATACAGTTA CCGGCAACTG
TTCTGGCTGA CCGGCATCCT GGCCTTCATG ATTTCCTCGG TGTGCAACAA CCTGACCACC
GCCCTCCTGA TGGGCGCGGT CGTCATGGCC CTGGGCAAAG ACTGTCCGCG CTTCGTCACG
CTGTCTTGCA TCAACATCGT GGTCGCCGCC AATGCCGGCG GGTCGTTCAG CCCTTTCGGC
GACATCACCA CCCTGCTGAT CTGGCAGAAG GGCAAAGTCC CTTTCGTGGA TTTCTTCAAC
CTACTGATCC CCTCGATCAT CAATTTTGCT CTCCCGGCGA CCTGCATGTT CCTGTTTCTC
CCCCGCCATC ACCCGACGGC GGTGGACAAA CGGATTCCGA TCAAAACCGG CGGACGCCCC
GTCATCGTGC TGTTCCTCCT GACCATCATC ACCGCGGTGT GCTTCGAGAA CTTCCTGAGC
TTGCCACCCG CGGCCGGCAT GATGGCCGGG CTGACTTACC TGAAGTTCTA CAGCTTCTAC
TTGCAGAAGA AAACCGCCAG CCGCTCTCCC GACCCCGACG AGGTCGTCCC GCCGGACGAA
CCGATCGGAG ACGCCGAGAC ATTCGACATC TTCAAGAAAG TCTCGCGCCT GGAATGGGAT
ACGCTGCTGT TTTTTTACGG CATCATGTTG AGCATGGGGG GACTGAGTTT CATCGGCTAT
CTGGAACGCA TCTCCCGGTT CCTCTACGCC GATCCGGAGC GGACCACCTT TGCCAACATC
CTCGTCGGGA TCGCCTCTGC CTTCATCGAC AACGGCACCA TCATGCTGGC GGTCCTGACC
ATGGACCCGA AGATCTCGCA GGGCCAATGG CTGCTGGTGA CCCTCACGGC CGGCGTAGGG
GGCAGCCTCC TCGCCATCGG TTCGGCCGCC GGCGTCGGCC TGCTCGGCCA GACCAAGGGT
TACTATTCCT TCGGCGCCCA CATCAAATGG GGACCGGTGA TCCTGCTGGG CTATTTCGCC
AGCATCGGTG CCCATTTCCT GATCAACCAG TCCCACTTCT AG
|
|---|
| Protein sequence | MLPLPLFRLR HWRELPPMRL LFTILAACAL FVGVPELCLA GEHGPVGPLD LTRHWAGYLA
VLIFFLAYFL AMAEEVTELR KSKPMVFAAS VIWGLIAAVY VGGGMPEQAG MAFRASLLTY
AELLLFILVS MTYLNAMEDL DVFEALGCWL LGRGYSYRQL FWLTGILAFM ISSVCNNLTT
ALLMGAVVMA LGKDCPRFVT LSCINIVVAA NAGGSFSPFG DITTLLIWQK GKVPFVDFFN
LLIPSIINFA LPATCMFLFL PRHHPTAVDK RIPIKTGGRP VIVLFLLTII TAVCFENFLS
LPPAAGMMAG LTYLKFYSFY LQKKTASRSP DPDEVVPPDE PIGDAETFDI FKKVSRLEWD
TLLFFYGIML SMGGLSFIGY LERISRFLYA DPERTTFANI LVGIASAFID NGTIMLAVLT
MDPKISQGQW LLVTLTAGVG GSLLAIGSAA GVGLLGQTKG YYSFGAHIKW GPVILLGYFA
SIGAHFLINQ SHF
|
|---|
| |