| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2718 |
|---|
| Symbol | |
|---|
| ID | 3104474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2906568 |
|---|
| End bp | 2907737 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637171849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_115119 |
|---|
| Protein GI | 53803163 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.057627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGC CTGCCGGGCT GCTGCCTTTC GACCCACGGC TCAGTCTACA CAGCGTGGTG
CAAACCACTT TCGAAAACTA TCCGCAAACG GCGATGATCG ACGCCATGCG CCTGGAAACC
AGCGCTCTGC AGCAGCGCAG TGACAGCTGG ATTCCTGGCT ACCCGATGGT CTACATCCAG
AACAACCAGA ACATCGCCGG CGACGGCGAG GGCATGACGC AATGGGGCTA CCAGGTCCCC
CTCTGGCGCT GGGGACAGCG GGATGCGAGC CAGGCAGTCA CCGACCGAGC GGCCGAAAGC
ACCGAACGGT TCGGCCTGGG ACTCAAACAC GAGGTCGCGG GCCTGGTCCG GGAGAGTCTG
TGGAATCTCA AGATGATGCA AAACCGTCAT CAGTTCACCA GGACGGTGTA CGAGGTGTCG
CTGAAACTGG TCGAAACGGT CAAACGTCGG GTCGAGCTCG GCGATCTCGC CCAGGCCGAC
CTGCTGCTGG CACAAAGTGA CTCTTTGGAA AAGAAGACCG CGCTCACCCA GGCTGCCGTC
GACCTTCAGC ATGCCCACCA GGCTTTCGCT AACCTGACCC GAATGCCGGC GGCACCTGAC
AAATTCGATG AAGAGCTCTC CAGGCTGACT GCCATCACCG AGGAACACCC CCAGCTGGCC
GCCCTGAATG CCATGATCGA GCGCGCCCAG GCCGATGTGG AATTCGTCCG GCAATGGAAG
CAAGGTACCC AGCCCACCGT CCTGATCGGC GCCCAGCATC GCGCCTTCAT CAACAAAAAC
CTGCAGAACG ACACCAACGT GGTCCTCCAG ATACCGATCG GGGGCGATGC TTATAATGAA
CCCTTCGTCG CCCAGGCGAA TCTCGCGCTG ACTCAGAAGA TCACGGAACG CGACAACCTG
ATCCGCCTGC TCCAGCGATC GCTCAAGCAG GCGCAGCAAA CCCTGGAGGC GGACCGCAAG
GCCCTGGACA TCGCCAGGAA CCGGCGCCAG ATGGCCGAGA CACTGATCCG GATGAACCGC
ATCGCACTCG AAACAGGGGA AATCCAGATG ATCGACTTTC TGAAGGTCCA GACCACGGCA
CAGGCGGCCA TCTGGGACGC GATGCAGAAG GAAATCCAGT TGAAGCGGGA CATCGCCGCT
TATAACCAGG TGGTGGGGGT GACACCATGA
|
|---|
| Protein sequence | MAEPAGLLPF DPRLSLHSVV QTTFENYPQT AMIDAMRLET SALQQRSDSW IPGYPMVYIQ
NNQNIAGDGE GMTQWGYQVP LWRWGQRDAS QAVTDRAAES TERFGLGLKH EVAGLVRESL
WNLKMMQNRH QFTRTVYEVS LKLVETVKRR VELGDLAQAD LLLAQSDSLE KKTALTQAAV
DLQHAHQAFA NLTRMPAAPD KFDEELSRLT AITEEHPQLA ALNAMIERAQ ADVEFVRQWK
QGTQPTVLIG AQHRAFINKN LQNDTNVVLQ IPIGGDAYNE PFVAQANLAL TQKITERDNL
IRLLQRSLKQ AQQTLEADRK ALDIARNRRQ MAETLIRMNR IALETGEIQM IDFLKVQTTA
QAAIWDAMQK EIQLKRDIAA YNQVVGVTP
|
|---|
| |