Gene MCA2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2713 
Symbol 
ID3104397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp2899912 
End bp2900961 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content66% 
IMG OID637171844 
Productlipopolysaccharide heptosyltransferase-1, putative 
Protein accessionYP_115114 
Protein GI53803168 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02193] lipopolysaccharide heptosyltransferase I
[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGACC GCCCCGGCTC CATCCTCATC GTCCGGCTCG GCGCCATCGG TGACATCGTC 
TTCGCTTCCG CCCTGATTCC GGTGCTGCGG CAGACGTTTC CCCAGGCCCG GCTGGTCTGG
CTGGCCGACG AAGCCAACCA GGATCTGCTG ATTCACAATC CACGGCTGGA CCGGGTCGCG
ATCTGGCCGC GCGCCCGGTG GGCCAGGCTG CGCAAGGAAA GGCATTACGG CGCCCTGCTC
GAGGAATTCC GCAACTTGGT ACGGAGCCTG CGGGAAGAGC GCTTCGACTG GGTCCTGGAC
CTGCAGGGAC TCCTGAAGAG CGGCGTGTGG GCGGCTCTGG CCGGCGGTAA GACCCGCATC
GGCCTCGGCT CACGCGAAGG CAGCCAATTC CTGATGACGA AGCGCATCGA CCGCCGCACC
GAGTCCAACG CCATCGGCAA CGACTACCTC AAACTGGCCA TCGAACTTGG ACTCGACACC
GAGTCCTTCG CCATGGATTT CGCGCCGGGA GACGAGGCCA TGGCGGAGGC CGCAAAGATC
CTGGATTCGC TCGGGATCAC CGGCCCTTAT GCGGCGATCT TCCCCTTCAC CACCCGCCCC
CAGAAGCACT GGATCGACGG GAACTGGTCG ACCCTGGCCG ATGAGATCAG CGCCCGTTAC
GGCTGGCCCG TCGTGATGCT GGGCGGGCCG GGCGACACTG AACGGGCCGA AAGAATACGG
AGCCGCTGCC GATCGGACCT CGAGAATCTC ACGGGAAGGA CCGGACTGGC CGTCAGCGGC
GCATTGATCC GGCGCGCCGG TTTAGGCATC GGCGTGGATA CAGGTCTGAC CCACATGAGC
ATCGCCCTCG GGCGCCCCAC TGTCGCCCTG TTCGGCTCCA CCGCCCCCTA TCTGGAAACG
GGGAGGGAAG ATGCAGTGGT GCTGTACGAA GCCCTGCCCT GCTCGCCCTG CGAACGCCGC
CCCACCTGCG GCGGAGCCTT CACCTGCATG GCTCGACTCA CGGTCGAGAA GGCCCTCGCC
GCAATCGACG GCATCCTGCA CCGGCCTTGA
 
Protein sequence
MTDRPGSILI VRLGAIGDIV FASALIPVLR QTFPQARLVW LADEANQDLL IHNPRLDRVA 
IWPRARWARL RKERHYGALL EEFRNLVRSL REERFDWVLD LQGLLKSGVW AALAGGKTRI
GLGSREGSQF LMTKRIDRRT ESNAIGNDYL KLAIELGLDT ESFAMDFAPG DEAMAEAAKI
LDSLGITGPY AAIFPFTTRP QKHWIDGNWS TLADEISARY GWPVVMLGGP GDTERAERIR
SRCRSDLENL TGRTGLAVSG ALIRRAGLGI GVDTGLTHMS IALGRPTVAL FGSTAPYLET
GREDAVVLYE ALPCSPCERR PTCGGAFTCM ARLTVEKALA AIDGILHRP