Gene MCA2607 details

Gene Information

• Locus tag: MCA2607
• Symbol: cstA
• ID: 3103897
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2794498
• End bp: 2796573
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637171742
• Product: carbon starvation protein CstA
• Protein accession: YP_115012
• Protein GI: 53803255
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1966] Carbon starvation protein, predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.325051
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCTCTC GCAAGCTCAC CGTCGTCCTG ACTTGGTCCG CCGTCGCGCT GCTCGGTGCC 
TCCGCACTGG GAGGAATCGC GCTAAACCGC GGTGAGTCGG TCAACAGCCT CTGGTTCGTG 
ACCGCGGCGG TCTGCGTCTA CGCCCTGGGT TATAGATTCT ACAGTGCCTT TGTTGCAACC 
CGCGTGCTGC TGCTGGATGC CGGCCGCGCC ACACCCGCCG AACGCTTCAA CGACGGCCGC 
GACTTCGTAC CCACCCACCG GTGGGTCGTG TTCGGCCACC ACTTCGCCGC GATCGCCGGC 
CCCGGGCCGC TGATCGGCCC GACCCTGGCG GCCCAGTTCG GCTATCTGCC CGGCACGCTT 
TGGATACTGA TCGGCGCTGT GTTCGGCGGC TGCGTGCAGG ACTTCGTGGT GCTGGTGTGC 
TCTATCCGCC GCGACGGCCG TTCGCTCGGC CAGATGGCCC GCGACGAGTT GGGCCCCATC 
GGCGGCTCGG CGGCGCTCGT CGGTGTGATG GCGATCATGA TCATCCTGAT CGCGGTGCTC 
GGCCTGGTCG TGGTCAACGC CATGAAGCAC AGCCCCTGGG CGACTTCGAC GGTGGCGGCG 
ACGATTCCCA TCGCGGTGCT GATCGGCCTC TACATGCGCG AGATCCGCCC CGGGCGGGTG 
ATCGAGGCGA CGCTGATCGG CGTCACCCTG CTGATCCTCT CGGTCGCCGG CGGCGGCTGG 
ATCGACCACC ATCCGGCGAT CCGGACCTGG TTCGACTACG ACGCCCCCAC CCTGGCGCTG 
ATGATCATCG CCTACGGTTT CGCCGCTGCC GTATTGCCGG TGTGGCTGCT GCTGGCGCCG 
CGCGACTACC TCTCTACCTT CATGAAACTG GGTACCATCG CCGCCCTCGC CGTCGCCATC 
CTGATCCTGC ATCCCGACAT CAGGATGCCG GCGCTCACGG CCTTCATCGA CGGCACCGGG 
CCGATCTTCG GCGGCAAGCT GTTTCCGTTC GTGTTCATCA CCATCGCCTG CGGCGCGATC 
TCCGGTTTCC ACGCCCTGAT CTCCTCCGGC ACCACGCCCA AGCTGCTGGC CAACGAGGCC 
GACGCCCGCT TCATCGGCTA TGGGGCGATG ATGATGGAAT CCTTCGTGGC CATCATGGCC 
ATGATCGCGG CGACCGTGCT CGACCCCGGC ATCTATTTCG CCATCAACAG CCCGGCCGGC 
GTGGTCGGCA AGGAAGCGGC CGACGCGGTG GCGACGATCT CGTCCTGGGG CTTCCCGGTC 
GACGTCGGGC AAATGGCGAC CCTGGCCCGG GAGATGGGCG AGGCGAGCCT GTTCGCCCGC 
ACCGGCGGCG CCCCTTCGCT GGCCGTGGGC ATGGCATCCT TGTTCGCCAG CGCGTTCGGC 
GACGGCCTGC TGGCTCTGTG GTACCACTTC GCCATCATGT TCGAGGCACT GTTCATCCTG 
ACGACGCTGG ACGCCGGCAC CCGCGTCGCC CGCTTCATGC TGCAGGATAT GCTGGGCAAC 
TGGCATCCCG TGCTGGGACG GACCGGCTGG TATCCCGGCG TACTGTTCTC CTCGGCGCTG 
GTCGTCGCCG GCTGGGGCTA TTTCCTGTAC ATGGGCACCA TCGACCCGCT GGGCGGCATC 
AACAGCCTGT GGCCGCTGTT CGGCATCGCC AACCAGATGC TGGCCGCCAT CGCCCTGTGC 
GTCGCCACCA CCATCCTGGT CAAGACCGGC AAGGCTTCCT ACGCCTGGAT CACCGCCCTG 
CCGCTGTCCT GGCTGATCGT GGTCACCAGC AGCGCGGCCT GGGAAAAACT GTTCAGCCCC 
GAACTGCGCG TGGGCTTCCT GGCGCATGCC CGCGACCTGG GCGACAAGCT GGCGGCCGGC 
CTGCTTTCGG CGGACCAGGC CGCCAAGGCG CCGCAGCTGA TCTTCAACGA CTATCTGGAT 
GCCACCCTGA CCGCGGTTTT CATGGGGCTG AGCTGGATCC TGGCGGCGGA CACGACGAGG 
GTCTGCTACT GCGTGCTCGC CGGGCGCCCG CATCCGCCCA GCAGCGAGTC GCCCCGCATC 
CCGAGCCGGC TTACGGAAAA CTGGGTCAGA GACTGA 

 

Protein sequence

MPSRKLTVVL TWSAVALLGA SALGGIALNR GESVNSLWFV TAAVCVYALG YRFYSAFVAT 
RVLLLDAGRA TPAERFNDGR DFVPTHRWVV FGHHFAAIAG PGPLIGPTLA AQFGYLPGTL 
WILIGAVFGG CVQDFVVLVC SIRRDGRSLG QMARDELGPI GGSAALVGVM AIMIILIAVL 
GLVVVNAMKH SPWATSTVAA TIPIAVLIGL YMREIRPGRV IEATLIGVTL LILSVAGGGW 
IDHHPAIRTW FDYDAPTLAL MIIAYGFAAA VLPVWLLLAP RDYLSTFMKL GTIAALAVAI 
LILHPDIRMP ALTAFIDGTG PIFGGKLFPF VFITIACGAI SGFHALISSG TTPKLLANEA 
DARFIGYGAM MMESFVAIMA MIAATVLDPG IYFAINSPAG VVGKEAADAV ATISSWGFPV 
DVGQMATLAR EMGEASLFAR TGGAPSLAVG MASLFASAFG DGLLALWYHF AIMFEALFIL 
TTLDAGTRVA RFMLQDMLGN WHPVLGRTGW YPGVLFSSAL VVAGWGYFLY MGTIDPLGGI 
NSLWPLFGIA NQMLAAIALC VATTILVKTG KASYAWITAL PLSWLIVVTS SAAWEKLFSP 
ELRVGFLAHA RDLGDKLAAG LLSADQAAKA PQLIFNDYLD ATLTAVFMGL SWILAADTTR 
VCYCVLAGRP HPPSSESPRI PSRLTENWVR D