Gene MCA2593 details

Gene Information

• Locus tag: MCA2593
• Symbol: nspC
• ID: 3103145
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2778072
• End bp: 2779199
• Gene Length: 1128 bp
• Protein Length: 375 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637171729
• Product: carboxynorspermidine decarboxylase
• Protein accession: YP_114999
• Protein GI: 53803251
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0019] Diaminopimelate decarboxylase
• TIGRFAM ID: [TIGR01047] carboxynorspermidine decarboxylase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCCGGAGA CTCCGGCCTT CGTCTACGAC CAGACCGCCA TCGACCGGAC CCTCTCGACC 
TTTGAAGAAG CGGCCGCAGG GTCCGGCCCC CGTCTGCTTT ATTCGGTCAA GTCGTTCCCA 
TTCCTGCCGC TGTTGCGGCG GATCGCGCCA CGCGTCGACG GCCTCTCGGC CAGCTCGCTG 
TTCGAGGCGA GGCTCTGCGC CGAGGCACTG GCGGGGCGGG GCGGTCTGCA CATCACGACG 
CCGGGATTTC GGCCCGGCGA GATCGATGAA ATCGGCAGGC TCTGCGATTT CGTGAGTTTC 
AACTCGCTGG AACAGTTCGA CCGCTGGTCG GCCCGAATGG AAGGCACGGC CAGCGTGGGA 
CTGCGTGTGA ATCCCCAGCT GTCCTTCGCC CCCGATCCCC GTTATGACCC CTGCCGCCCG 
CATTCGAAAC TCGGAGTTCC CCTCGACCGG CTGGTACCGG CCGAAGTCGG GCGGCTGGAA 
CGGCTGGAAG GCATTCATTT CCATACCGTC TTCGACTGCG CAAGTTTCGA GCCCCTCGCC 
GAAATCCTGG CCAAGCTGGA AAACAAGCTG GGGGAACGTC TGAAACGGCT GCGGTGGCTG 
AACTTGGGCG GCGGTTACCG GCTGGAAGGA GACCTGGGAC GGCTGGCCGG CTTTTCCACC 
CGGCTGCAGC GCGATTATGG CCTGGAGGTC TATTTCGAGC CGGGCAAAGC GGTGATCGGG 
TCCGCCGGCT ATCTGGTCGC CAGCGTCATC GACGTGTTCA ACAGCGGCGG AAAGACGGTG 
GCCGTCCTGG ACAGCAGCAT CAACCACCAT CCGGAAGTGT TCGAATACCA GCGCAGCCCG 
CGCCTGGCCG AGGTCTGCGA GGAAGGGAGG GAAACGGCGA TCCTGGCCGG CGGCACCTGC 
CTGGCCGGGG ACCTGTTCGG CGAGTACGCC CTCCCGACGC GCCCCCGGAT CGGGGACCGC 
CTGGTTTTCG AGGATGTCGG AGCCTACACC CTGGTCAAGG CCAACCGCTT CAACGGCCAC 
AACCTCCCCT CGATCTACCG TTGGGACGGG GAAGCATTGC ACCTCGAACA AAGCTACGGC 
TACGAAGACT ACCGGAGGCA GTGGGGGGGC GAGCCCGCCG CTCAGTAA 

 

Protein sequence

MPETPAFVYD QTAIDRTLST FEEAAAGSGP RLLYSVKSFP FLPLLRRIAP RVDGLSASSL 
FEARLCAEAL AGRGGLHITT PGFRPGEIDE IGRLCDFVSF NSLEQFDRWS ARMEGTASVG 
LRVNPQLSFA PDPRYDPCRP HSKLGVPLDR LVPAEVGRLE RLEGIHFHTV FDCASFEPLA 
EILAKLENKL GERLKRLRWL NLGGGYRLEG DLGRLAGFST RLQRDYGLEV YFEPGKAVIG 
SAGYLVASVI DVFNSGGKTV AVLDSSINHH PEVFEYQRSP RLAEVCEEGR ETAILAGGTC 
LAGDLFGEYA LPTRPRIGDR LVFEDVGAYT LVKANRFNGH NLPSIYRWDG EALHLEQSYG 
YEDYRRQWGG EPAAQ