Gene MCA2588 details

Gene Information

• Locus tag: MCA2588
• Symbol: lpxD
• ID: 3104051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2771762
• End bp: 2772826
• Gene Length: 1065 bp
• Protein Length: 354 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637171724
• Product: UDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase
• Protein accession: YP_114994
• Protein GI: 53803264
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATGTCA CCGTTTCGGA AATCCTCGAA CGCTTCCAGC CGGAAGGGCT GATCACGAAC 
CACATCGGCC CTGACTCCGT GATTACCCGG GTCGCGCCGA TCGAAGACTG CGCCCCCGGC 
GACCTGGTGT TCATCGACAA GCCCAAATAC GTCGGCGACG TACTCCAGCG CAAACCGGCC 
GCCGTCCTCA CCACCCCGGC CATCGCCGCC GAATTCGGCG AATCGCCGGC ACTGGCCGTC 
CTGATCGCGC CCAACGTCCG CCTCGCCATT GCGCTGATCA AGCAAGCCTA CGCCGACCGC 
GACGTGCGCG ACACCGAATG GCCACGCATT CATCCTTCCG CCGTGATCCA CGCCAGCGTG 
GAAGTGCCCG CCGATGCCAT CATCGGCCCC GGCGTGGTCA TCGGCGCCGA TGTCGTGCTG 
GGCCGCGGCG TGGTGTTGAT GGCCAACGTG GTGATCGAGC GCGGCGCCCG GATCGGCGCG 
GAAACCGTGC TGCATCCCGG CGTAACCGTC TGCATCGACT GCGAAATCGG CGCCGGCTGC 
ATCCTCAAAC CCGGCTGCGT GATCGGCTCG GAAGGCTTCG GGTTCGCCCA GGACGCCCAG 
CGCCGCAACT ACCGCATTCC GCACACCGGC AAGGTCATCA TCGAAGACCG CGTGGTGATC 
GGCGCCAATA CCACCATCGA CCGCGCCACC TACGGCGCGA CCGTCGTCCG CAGCGGCACA 
ATCATCGACG CGCTGGTGCA CCTGGGCCAT AACGTCGAGA TCGGCGAGGA CTGCATCCTT 
TGCGCCCATA CCGGGCTGTC CGGCTCCACC CGCTTCGGCA AGCGCGTCAT CGCCACCGGC 
CAGACCGGCA CCATCGACCA CATCACCGTC GCCGACGACA GCGTGCTGCT GCACCGCGCC 
GGCCTCAACA CCAGCATCAA ACAGCCCGGC ATGTATGCCG GCGGCCCCGC CCAGCCCTTG 
CAGCAATACC TCAAGAACAT GGCGGTGATG CCGCGCCTGC ACGAAATCTG GAGCCGGTTG 
AAGAAGCTGG AAAAAGCCGT CGCCCAACTC GGTTCCGCCG AATAA 

 

Protein sequence

MHVTVSEILE RFQPEGLITN HIGPDSVITR VAPIEDCAPG DLVFIDKPKY VGDVLQRKPA 
AVLTTPAIAA EFGESPALAV LIAPNVRLAI ALIKQAYADR DVRDTEWPRI HPSAVIHASV 
EVPADAIIGP GVVIGADVVL GRGVVLMANV VIERGARIGA ETVLHPGVTV CIDCEIGAGC 
ILKPGCVIGS EGFGFAQDAQ RRNYRIPHTG KVIIEDRVVI GANTTIDRAT YGATVVRSGT 
IIDALVHLGH NVEIGEDCIL CAHTGLSGST RFGKRVIATG QTGTIDHITV ADDSVLLHRA 
GLNTSIKQPG MYAGGPAQPL QQYLKNMAVM PRLHEIWSRL KKLEKAVAQL GSAE