| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2582 |
|---|
| Symbol | rpe |
|---|
| ID | 3104203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2766321 |
|---|
| End bp | 2767013 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637171718 |
|---|
| Product | ribulose-phosphate 3-epimerase |
|---|
| Protein accession | YP_114988 |
|---|
| Protein GI | 53803277 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
|---|
| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAT TCTGGATCGC CCCCTCGATT CTCTCCGCCG ACTTCGCCCG TCTCGGCGAG
GAAGTGGACG ACGTCCTCAA GTCGGGCGCC GACATCGTCC ATTTCGACGT GATGGACAAC
CACTACGTCC CGAACCTGAC CATCGGCCCG CTGGTGTGCG AGGCATTGCG CAAGCACGGC
GTGACCGCGC CGATCGACGT GCACCTGATG GTCAAGCCGG TCGACCGCAT CATTCCCGAT
TTCGCCAAGG CCGGGGCCAG CTACATCACC TTCCATCCGG AGGCCTCCGA GCACATCGAC
CGCAGCCTGC AACTCGTCAA GGACTCCGGC TGCAAGACCG GGCTGGTGTT CAATCCGGCC
ACACCGCTCA ACTATCTGGA TCACGTCATG GACAAGCTCG ACATGATCCT GCTGATGTCG
GTCAACCCCG GCTTCGGCGG CCAATCCTTC ATCCCCTACG TGCTGGACAA GGTCCGCGAG
TGCCGCCGCC GCATCGACGC CAGCGGCCGC AACATCCGCC TGGAGATCGA CGGCGGCGTC
AACGCCAGGA ACATCCGCGA GATCGCCGCC GCGGGCTGCG ACACCTTCGT CGCCGGCTCG
GCGGTGTTCG GCGCGGGCAA GGCCGAAGAT CCGAACCGCT ACGACTCCAT CATCCGCGCC
CTGCGCGACG AACTGGCCCA GACCCGCGCA TGA
|
|---|
| Protein sequence | MNEFWIAPSI LSADFARLGE EVDDVLKSGA DIVHFDVMDN HYVPNLTIGP LVCEALRKHG
VTAPIDVHLM VKPVDRIIPD FAKAGASYIT FHPEASEHID RSLQLVKDSG CKTGLVFNPA
TPLNYLDHVM DKLDMILLMS VNPGFGGQSF IPYVLDKVRE CRRRIDASGR NIRLEIDGGV
NARNIREIAA AGCDTFVAGS AVFGAGKAED PNRYDSIIRA LRDELAQTRA
|
|---|
| |