Gene MCA2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2562 
Symbol 
ID3103355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand
Start bp2743576 
End bp2745312 
Gene Length1737 bp 
Protein Length578 aa 
Translation table11 
GC content49% 
IMG OID637171700 
Productglycosyl transferase, group 1 family protein 
Protein accessionYP_114970 
Protein GI53803314 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTATGGA TAGCCGAAAG CGATGACGAG TGCGCACCTG ATTTCCTCGC CAACATGGTT 
CCCCATTTCA AACGCGAAGA AATTCTTCTT GCTTACGGCA ATATCAGCTA CATCAACGCC
GACGGAACCC CCAACAGCGA CCTTTCCAAC TATTATGACG GTTTGACAGA CCTCGATTGG
AGCCATTCTC ACATCGTTTC TGCTTGGCGG GCCTTTACAG GACCTTTTGC CGTCAAGAAT
ATCATTCCAA ATGTCTCCGG CGCGGTGTTC AGAAAACCAA TTCTCACCGA GGCCGAAAAA
AGCCGCTTGA CTTCATACAC GTTCGCTGGT GACTGGTACT TTTATGCACT GATTGCGCGC
GGCGGCTCGA TCGCTTTCTG TAATGAAGCC AGATCTTATT TTCGACTCAA CCGTACGAGC
ACTTCACAGA AAGCATTTTT CTCCGAAAAG CATCTCTCAG AACATCGCAT GATCGTTCAG
GATATCCGCA AGCTATACGG AATCAAGGAA AATGCCATTC AGCTCCATGC GGAAGAGCTC
GCACGAGTAC TAAAACATCG AATACCTGAT ATTTCTGTCG CCGACGTCGC GAGACTGATA
GATACCAAAG AACAAGGACC GAGAGACCTG CGGATCTGTA TTGCCAGCTA TGGCTTTACG
GTTGGCGGAG GGGAGATCAT ACCCATCGAG ATTGCGAATG CGCTGAGAAC ACGGGGACAC
CATGTAACGT TCCTGGCTTT GATGCAAAAT TTCCATGACG ACATTCCTGT TCTTCGCCAC
CGTCTTCGCA ACGACATACC AGTTATCTAT TGGGATGAAG TTAGGAATAA TTTTCAAGGG
TTCCTGAATG AGTATGGTAT CGAGCTGATC AACTCCCACA ACTTCGGGGT AGAATATTTC
CTGTATTGCT CCGGCACCCA AATCAACATT CCCTATATTT CCTCGCTGCA TGGCGGCTAT
GAATCGGTCG AGAAAGAGTT CTTGACAGCG GATTTCATTG CCTACGTCAG GCGCAATGTC
AACGAATGGT TATACCTCTC GGAGAAGAAC ATCATTCCCC TGACGGAACG GGGCCTGAAT
GGTATTCACT TTACGAAATC TTTTAACGCG CTTACCTTGC GTCCCGCAAA TGCAGGACTC
GAACTTCGTA TCCGACAAAG CCTCAATGCA GGCAACGACT CCGTACTCCT GGTTCTCGCT
TCGCGTGCGC TCCATGAAAA AGGATGGCAG ACAGCGATCG AGGTTACACA AAGATTGCGG
GCTCAAACCA ACCGTGACTG CAGATTATTG CTGATCGGAG ATGGCCGGGA TTTTGACGCG
ATCAGGGCAG CCAATCTCGA CAAACACTTC GTGCATTTTC TCGGACGGCT CGACAATCCT
TGTCCGGTCA TAGACGAGTG CGACTTTGGG ATTTTCCCCA GCACCTTTTC TGGCGAATCC
TTTCCTCTTT TCGTTCTAGA ATGCCTTCAA AGTGGTCTGC CGGTCGTCGC GACGGACATT
GGCGAGATTC CATCCATCAT GACCACGACG ACCGGTGAAA TACCTGGACA GGTGGTCTCG
AGAAACCAGG GTGAACAACT TCTGATCAAC GAAATGGTAC AGGCCCTGGC CGGCATGATT
GATGATGATG CAAGGTTGCG CTCTGCAAAG CGAGCCGCTC GTATCGCTGG CGAGCGATTC
TGTATAGAGA GACTCACGGA TTTCTATCTC GATACCTTCT TAAGATATTT CCATTAG
 
Protein sequence
MVWIAESDDE CAPDFLANMV PHFKREEILL AYGNISYINA DGTPNSDLSN YYDGLTDLDW 
SHSHIVSAWR AFTGPFAVKN IIPNVSGAVF RKPILTEAEK SRLTSYTFAG DWYFYALIAR
GGSIAFCNEA RSYFRLNRTS TSQKAFFSEK HLSEHRMIVQ DIRKLYGIKE NAIQLHAEEL
ARVLKHRIPD ISVADVARLI DTKEQGPRDL RICIASYGFT VGGGEIIPIE IANALRTRGH
HVTFLALMQN FHDDIPVLRH RLRNDIPVIY WDEVRNNFQG FLNEYGIELI NSHNFGVEYF
LYCSGTQINI PYISSLHGGY ESVEKEFLTA DFIAYVRRNV NEWLYLSEKN IIPLTERGLN
GIHFTKSFNA LTLRPANAGL ELRIRQSLNA GNDSVLLVLA SRALHEKGWQ TAIEVTQRLR
AQTNRDCRLL LIGDGRDFDA IRAANLDKHF VHFLGRLDNP CPVIDECDFG IFPSTFSGES
FPLFVLECLQ SGLPVVATDI GEIPSIMTTT TGEIPGQVVS RNQGEQLLIN EMVQALAGMI
DDDARLRSAK RAARIAGERF CIERLTDFYL DTFLRYFH