| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2538 |
|---|
| Symbol | gpsA |
|---|
| ID | 3105046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2712933 |
|---|
| End bp | 2713940 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637171679 |
|---|
| Product | glycerol-3-phosphate dehydrogenase (NAD(P)+) |
|---|
| Protein accession | YP_114949 |
|---|
| Protein GI | 53803356 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.514488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCACT GCATCAGCGT TCTCGGCGCC GGCTCCTGGG GCACGGCGCT GGCCCTGCTC
ATCGCCAGGA ACGGCGTGCC CACTCTGCTG TGGAGCCACC GCCGGGAACA CGCCGAGGCC
ATGGCGGCAG AGCGCCGGAA CGCACATTAT CTGCCCCATG CCACATTTCC CGACACCCTG
AGCGTGACGC CGGACTTGGC CGAGGCAGCC GCCACGGCCA GCGATGCCGT ACTGGTCGCG
GTCCCCAGCC ACGCCTTCCG CGCCACGCTC GACCTCTGCG CCCCACACCT GCAACCGGAA
GCCGGTCTCA TGTGGGCCAC CAAGGGACTG GACCGCACCC GCGGCTGTCT GCTGCACGAA
ACCGCCCGCG AGATTCTCGG CCCAGACCGT GCGCTCGCCG TGCTGTCGGG ACCGACTTTC
GCCGCCGAAG TGGTCGCGGA ACTGCCCAGC GCCATCACTG TCGGCGCCAG TAGCGAAGCC
TTCGGCGCCA AGATCGTTTC CTGGCTGCAC AACGCCTATT TCCGCGCCTA CACCACCGAC
GACCTCATCG GCGCCCAGCT GGGAGGCGCC TGCAAGAACG TGCTGGCGAT CGCCGCCGGC
ATCTCCGACG GCTTGGGGTT CGGCGCCAAC GCCAGGGCGG CCCTCATCAC CCGGGGACTG
GCCGAGATGA TGCGGCTGAG TCTCGCCCTG GGCGCCAGGA CCGAAACGCT CATGGGCCTA
GCCGGGGTCG GCGATCTGGT ACTCACCGCC ACCGACAACC AGAGCCGCAA CCGCCGCTTC
GGCCTGGGGG TGGGCAAAGG CAGGCCGCGT GAGGAAATCC ACGCCGAGAT CGGCCAGGAG
ATCGAAGGCA TCCTGGCGGC CCGGCTGATC CACGAACTCG CCGGCAGGAA GGGCGTGGAC
ATGCCGATCA CCGCCCAGAC CTACCGCGTG CTCTACGAAG GCTTGCCGCC GGAGGAAGCC
GTGCGCAATC TGCTGCTGCG GGACCCCAAG CCGGAATGGG ACCGCTAA
|
|---|
| Protein sequence | MRHCISVLGA GSWGTALALL IARNGVPTLL WSHRREHAEA MAAERRNAHY LPHATFPDTL
SVTPDLAEAA ATASDAVLVA VPSHAFRATL DLCAPHLQPE AGLMWATKGL DRTRGCLLHE
TAREILGPDR ALAVLSGPTF AAEVVAELPS AITVGASSEA FGAKIVSWLH NAYFRAYTTD
DLIGAQLGGA CKNVLAIAAG ISDGLGFGAN ARAALITRGL AEMMRLSLAL GARTETLMGL
AGVGDLVLTA TDNQSRNRRF GLGVGKGRPR EEIHAEIGQE IEGILAARLI HELAGRKGVD
MPITAQTYRV LYEGLPPEEA VRNLLLRDPK PEWDR
|
|---|
| |