| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2517 |
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| Symbol | ispD |
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| ID | 3104080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 2694719 |
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| End bp | 2695423 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637171658 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_114928 |
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| Protein GI | 53803275 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACTG ACGCGCGTTT CTGGATCGTC GTCCCCGCCG CCGGCGTGGG CAAACGGATG
GGGGCCGACA TCCCCAAACA GTACCTGGAC GTGGCGGGCA AACCAGTCCT GCAGCACACG
CTCGAACGCC TGCTCTCGGT CCGCCGCGTC ACCGCGGTCA TGGTCGCGCT GGGCGCGAAC
GACGAGTTCT GGCCGGAGCT GCCCTGCTCA CGCGAGCCGC GGGTGCTCGC CACGACGGGC
GGCAGGGAAC GCGCAGACTC CGTGCTGAGC GCCCTGACCG CCCTGGCCGG CCGGGCCGCG
GACGGCGACT GGGTGCTGGT CCACGACGCA GCCCGCCTCT GCGTCACCCG TGACGACGTC
GAGCGCCTCA TGGAAACCCT GGAAGACGAC CCCGTGGGCG GCATCCTGGC TCTGCCGGTC
ACCGACACCC TCAAGACGGT CGAGAACGGC ACCATCCAGG GCTCCGCAGA CCGCAGTCGC
GTCTGGCGCG CCCTCACCCC CCAGATGTTC CGCTACCGAG CGCTCAAAGA GGCGCTGGAA
GCAGCGGCAC GACGGGGACT GACGGTGACG GACGAAGCCA GCGCCCTGGA GCTGGCCGGC
CTGTCGCCGC GGGTAGTGGA GGGGCGCCCC GACAACATCA AGATCACCCG GCCGGAGGAC
CTCCCTTTGG CCGCCTTCTA TCTGGAGCGA CAATGTTTCG AATAG
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| Protein sequence | MSTDARFWIV VPAAGVGKRM GADIPKQYLD VAGKPVLQHT LERLLSVRRV TAVMVALGAN
DEFWPELPCS REPRVLATTG GRERADSVLS ALTALAGRAA DGDWVLVHDA ARLCVTRDDV
ERLMETLEDD PVGGILALPV TDTLKTVENG TIQGSADRSR VWRALTPQMF RYRALKEALE
AAARRGLTVT DEASALELAG LSPRVVEGRP DNIKITRPED LPLAAFYLER QCFE
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