Gene MCA2486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2486 
Symbol 
ID3104537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp2666947 
End bp2667879 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content68% 
IMG OID637171627 
Producthistone deacetylase/AcuC/AphA family protein 
Protein accessionYP_114898 
Protein GI53803335 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACGC TCTATATCAG CCATCCGGTG TTTCTCCGCC ACGACACCGG TCCCGGCCAT 
CCGGAAGGTT CGGTGCGCCT TGCCGCCATC GAAAGCGCTC TCGCCGCTCC GGAATTCCGG 
AGCCTGCGGC GTCTCGAGGC CCCCCGCGCC GACATCTCCC GGCTCGAACT GGTCCATTCC 
CGGCGGCACA TCGAACGGGT GTTCGCCTCC CTCCCCCAGA CCGGCCATCA CTTCGTCGAT 
GCCGACACGG TAGTCTCGCC GGAGTCGGGA GAAGCCGCAC TGCATGCAGT CGGCGCGGTA 
TGCCTGGCGG TGGACGAGGT GATCGGAAAA CGGGCGCGCA ACGCCTTCTG CGCGGTGCGT 
CCGCCGGGGC ATCACGCCGA ACCGGATGCG GCCATGGGCT TCTGCCTGTT CAACAACATC 
GCCATTGCCG CCGCCCATGC CCTCGCCAAC CACGGACTGC AGCGTATCGC CATCGTGGAT 
TTCGACGTGC ACCACGGCAA CGGGACCCAG GCCGCGTTCA GACGCAATCC GCAGGTGCTG 
TACGTTTCGA CCCACCAGTA TCCCTGGTAT CCGGGGACGG GCAGCGCCGA GGAAACGGGC 
GTCGGCAACC TGGTCAACAT CCCCCTTCCG GCGGGCACGG ACTCCGCAGC CTACCGCGAA 
GCCGTCACGG CCACCGCCTT GCCCGCCATC GACCGTTTCC GCCCCGAGCT AGTGCTCATC 
TCCGCCGGAT TCGACGCCCA CCGCGACGAT CCGCTGGCCG ACCTCGCGCT CACCGAGGAC 
GACTACGGCT GGATCACGGC GGAACTCATG AAGCTGGCGG ATCGCCATTC CGGCGGCCGT 
ATCGTATCCG CCCTCGAAGG CGGTTACGCC CTGGAGGCTC TGGGCCGGAG CGCCGCGGCC 
CATCTCCGGA CGCTGCTCCT CCCAGCCTCC TGA
 
Protein sequence
MTTLYISHPV FLRHDTGPGH PEGSVRLAAI ESALAAPEFR SLRRLEAPRA DISRLELVHS 
RRHIERVFAS LPQTGHHFVD ADTVVSPESG EAALHAVGAV CLAVDEVIGK RARNAFCAVR 
PPGHHAEPDA AMGFCLFNNI AIAAAHALAN HGLQRIAIVD FDVHHGNGTQ AAFRRNPQVL 
YVSTHQYPWY PGTGSAEETG VGNLVNIPLP AGTDSAAYRE AVTATALPAI DRFRPELVLI 
SAGFDAHRDD PLADLALTED DYGWITAELM KLADRHSGGR IVSALEGGYA LEALGRSAAA 
HLRTLLLPAS