| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2474 |
|---|
| Symbol | |
|---|
| ID | 3103524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylococcus capsulatus str. Bath |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002977 |
|---|
| Strand | + |
|---|
| Start bp | 2652395 |
|---|
| End bp | 2653789 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637171616 |
|---|
| Product | sigma-54 dependent DNA-binding response regulator |
|---|
| Protein accession | YP_114887 |
|---|
| Protein GI | 53803360 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTATA GCTTGTTGAT CATCGAAGAC GAGAAACTGC TCGGCTCGGA ACTGGTCCGG
CACTACGAAA GGGCCGGCTG GGACGTCGAT TGGGCCAAGA CGCTGGCCGA AGCGCGCAAC
CTGTTCACCA AGAAAGCGGT CGACCCGCTG CTGGTACTGT CCGACCGTAG CCTGCCGGAC
GGCAACGCAC TGGACCTCAT GGAGGAAATG CGCGGCCAGG GCAACACGTC GGAATGGCTG
CTGCTGACCG GCTACGGCAG CGTGCCGGAT TCGGTGCGCG CCCTCCGTCT GGGAGCCTAC
GACTTCCTGG AAAAGCCCTG CGAACTCGAA CGTCTCGACC TGGTGGTCGC CAGCGCGACG
CGCTCCGCCC AGGCGCAGCG CCGTCTGCTC GAACAGGCGC AGGAACGGCA CCGCCGCTAT
TCGCCGGAAG CCTACGTGGG CCGCAGCGAA GCCGCGCAGC GGGTACGCGA CATGCTGGAG
CGTCTCACCC GGGTGCCGTT CAGCGCCCTG ATCATCGGAG GCGAAAGCGG CACCGGCAAG
GGACTGGTCG CCCGCATCCT GCATTATTCG GGCAAACGCG CCCAGCAACC GCTGATCGAA
CTCAACTGTA CCGCCCTCCC CCACGACCTG CTCGAATCCG AGCTTTTCGG TCACGAGGCC
GGTGCTTTCA CCGGCGCCAT CGGCCGCCAC CGCGGCCTCA TCGAGCAGGC CGACGGCGGC
ACCCTGTTCT TGGACGAGAT CGGGGAAATG CACCTCGACC TGCAGGCCAA GCTGCTCAAA
GCCATCGAAG ACCGCAAGAT CCGCCGGCTG GGCTCGGAAA AGGAAATCAG CGTCGACGTC
CAGATCCTGG CGGCCAGCAA CCGCGATCTG GAAGAGATGG TGCGCAACGG GAGCTTCCGC
AGCGATCTTT TTCACCGGCT GAGCGTCTTC CGGCTGCAAC TGCCGCCCCT GCGTCAGGTC
AAGCAGGATC TGGAAGAACT GGTGCCGCTG CTGATCGCTG AATTCAACGC CAAGGCTGGA
AAGCAGGTGA AAGTCGTTTC CGACGAAGCA TGGAACCTGC TCCGGAACTA CGACTGGCCC
GGCAACGTCC GCGAACTGCG CAACGTCATC GAGCGCTGCG TGCTGTTCGC CGACGGCCCC
GTGTTCCCGG CGCAATGGCT GCAACTGCCG GGACACGGCA ACGCGCCGCA CCCTTCGCCG
GTGGCGCCGG GAACCGAATG CATCGTGCTG CCCCTGGACG GCAGCATGGC ACTGGACGAC
ATGGACTGCT ACATCATCCG CACCACGCTC GAACGCTATG GCGGCAACGT TACCGCCGCG
GCGCGGGCGC TGGGCGCCAC CCGCGAAACC CTGCGCTACC GCATCCGCAA GTACGGCCTC
AAGGAAACCG CCTGA
|
|---|
| Protein sequence | MAYSLLIIED EKLLGSELVR HYERAGWDVD WAKTLAEARN LFTKKAVDPL LVLSDRSLPD
GNALDLMEEM RGQGNTSEWL LLTGYGSVPD SVRALRLGAY DFLEKPCELE RLDLVVASAT
RSAQAQRRLL EQAQERHRRY SPEAYVGRSE AAQRVRDMLE RLTRVPFSAL IIGGESGTGK
GLVARILHYS GKRAQQPLIE LNCTALPHDL LESELFGHEA GAFTGAIGRH RGLIEQADGG
TLFLDEIGEM HLDLQAKLLK AIEDRKIRRL GSEKEISVDV QILAASNRDL EEMVRNGSFR
SDLFHRLSVF RLQLPPLRQV KQDLEELVPL LIAEFNAKAG KQVKVVSDEA WNLLRNYDWP
GNVRELRNVI ERCVLFADGP VFPAQWLQLP GHGNAPHPSP VAPGTECIVL PLDGSMALDD
MDCYIIRTTL ERYGGNVTAA ARALGATRET LRYRIRKYGL KETA
|
|---|
| |