Gene MCA2443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2443 
SymbolrnhB 
ID3104924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand- 
Start bp2624340 
End bp2624921 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content65% 
IMG OID637171586 
Productribonuclease HII 
Protein accessionYP_114857 
Protein GI53803396 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0013683 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTCTT TGGTCGCAGG CATCGACGAG GTGGGGCGCG GTTGTATCGC AGGGCCGGTG 
ATCGCTGCGG CGGTGATATT CGCTCCCGGT CAGGATACCC ATGGCCTCGC TGATTCGAAG 
CGGCTGCGCC CGGATCGCAG GCTGGTTTTG GCCGGCCGCA TCTGCTCCGA ATCCCTGGCT 
TGGGCGGTGG GCCGCGCGGA GGTGTCTGAA ATCGACCAGC TCAATATCCT CCGAGCCACC 
CATTTGGCCA TGTGCCGGGC GGTCGCAGCG CTGCCCGTCC TGCCGGACTG GGTCAGGGTG 
GACGGCAACC GCTATCCTCC CCTGGATTGT CCCGGCGAGG CTATCGTCGG CGGGGATGCG 
TCGGTGGCGG AGATTGCGGC CGCGTCGATA CTCGCCAAGG TCTTCAGGGA TCGCGAAATG 
GAGGTGCTGG ACCGGCTTTG TCCGGGCTAT GCGCTAGGGG TGCACAAAGG TTACCCCACC 
CGACTGCACA TCGATCGTTT GGCCAGTCGG GGAGCGAGCT TCTTTCACCG GCGCAGCTTC 
GCGCCGGTGC GGGCAGTCAT CGACCGGAGT TCGGCTTCAT GA
 
Protein sequence
MASLVAGIDE VGRGCIAGPV IAAAVIFAPG QDTHGLADSK RLRPDRRLVL AGRICSESLA 
WAVGRAEVSE IDQLNILRAT HLAMCRAVAA LPVLPDWVRV DGNRYPPLDC PGEAIVGGDA 
SVAEIAAASI LAKVFRDREM EVLDRLCPGY ALGVHKGYPT RLHIDRLASR GASFFHRRSF 
APVRAVIDRS SAS