Gene MCA2366 details

Gene Information

• Locus tag: MCA2366
• Symbol: rpsC
• ID: 3103259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: -
• Start bp: 2549416
• End bp: 2550087
• Gene Length: 672 bp
• Protein Length: 223 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 637171509
• Product: 30S ribosomal protein S3
• Protein accession: YP_114782
• Protein GI: 53803417
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0092] Ribosomal protein S3
• TIGRFAM ID: [TIGR01009] ribosomal protein S3, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.77058
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGGCAGA AAGTCAATCC TACTGGAATT CGTCTGGGAT ATATCAAAGA TTGGTCGTCG 
CGCTGGTTCG CGGACAGCAA GTCATATCCC GTATTTCTCA ACAACGACCT CAAGGTTCGC 
GAGTTTCTGA AGCAGAAACT CAAGCATGCG TCGGTCAGCC GGATCCAGAT CAATCGGTTG 
GCGAACAATG CCCAAATCAC GATCCATACG GCGAGGCCCG GAATAGTCAT CGGCAAGCGG 
GGTGAGGACA TCGACGCGCT GCGCCGGGAT GTGTCGCGCT TCATGGGTGT TCCCGTGCAG 
GTCAGCGTCG AAGAGATCCG CAAGCCCGAG CTGGATGCGC AGCTCGTAGC AGAAGGCGTG 
GCGCAGCAGC TTGAGAAGCG CATCATGTTC CGGCGCGCCA TGAAGCGCGC GGTGCAGAAC 
ACGCTGCGTG TAGGGGCCGA GGGTATCAAG ATCAGTGTCG CCGGCAGGCT CAACGGCGCC 
GAGATCGCGC GGACGGAATG GTATCGCGAG GGTCGGGTGC CGCTTCACAC CTTTCGCGCG 
GACATCGATT ACGGTTTCGC CGAAGCGGTA ACGACGTATG GGGTCATCGG CGTTAAGGTG 
TGGATTTTCA AAGGCGAGGT GTTCGAGCCC GTGCACACGG AGCCGAAAAC CCGCAGTGCG 
GTCGAAGCTT GA 

 

Protein sequence

MGQKVNPTGI RLGYIKDWSS RWFADSKSYP VFLNNDLKVR EFLKQKLKHA SVSRIQINRL 
ANNAQITIHT ARPGIVIGKR GEDIDALRRD VSRFMGVPVQ VSVEEIRKPE LDAQLVAEGV 
AQQLEKRIMF RRAMKRAVQN TLRVGAEGIK ISVAGRLNGA EIARTEWYRE GRVPLHTFRA 
DIDYGFAEAV TTYGVIGVKV WIFKGEVFEP VHTEPKTRSA VEA