Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2348 |
Symbol | rpsD |
ID | 3103674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | - |
Start bp | 2541472 |
End bp | 2542092 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637171491 |
Product | 30S ribosomal protein S4 |
Protein accession | YP_114764 |
Protein GI | 53803440 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0522] Ribosomal protein S4 and related proteins |
TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTAGAT ATCTGGGCCC GAAATGCAAG TTGAGCCGCC GCGAGGGGAC TGACCTGTTT CTCAAGTCGA GGGGCAAGTC CCTGGAATCG AAATGTAAGC TGGATCAGCC GCCCGGGCAG CACGGCCAGA AGCGGCCGCG GCTGAGTGAT TACGCGGCCC AGCTTCGGGA GAAGCAGAAG CTGCGGCGGA TTTACGGCAT CATGGAGCGG CAGTTTCGCA ATTATTATGC CGAGGCTTCC CGGCGGAAAG GCTCCACGGG CGAAAACCTG CTGACACTGC TGGAATCGCG TCTCGACAAC GTGGTCTATC GCATGGGGTT CGCCTCAACA CGCGCCGAGG CGCGCCAACT CGTATCGCAC AAAGCGATCA ATCTGAACGG GCGGACGCTT AACATACCTT CATACCAGGT GCAAAGCGGG GACGTCGTCG AGATTCGGGA TAAGGCTAAA TCTCAGGGCC GCGTCAAGGA CGCGCTGCAG GTCACCGAGC AGTACGGCTT TCCGTCTTGG GTGGACGTCG ACGTCAAGTC GATGAAAGGC ATTTTCAAAT CGGCACCGGA AAGGAGTGAG CTGGGCTCGG ACATCAACGA GCAGCTGGTC GTTGAGCTGT ATTCGAAATA G
|
Protein sequence | MARYLGPKCK LSRREGTDLF LKSRGKSLES KCKLDQPPGQ HGQKRPRLSD YAAQLREKQK LRRIYGIMER QFRNYYAEAS RRKGSTGENL LTLLESRLDN VVYRMGFAST RAEARQLVSH KAINLNGRTL NIPSYQVQSG DVVEIRDKAK SQGRVKDALQ VTEQYGFPSW VDVDVKSMKG IFKSAPERSE LGSDINEQLV VELYSK
|
| |