Gene MCA2287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMCA2287 
SymbolcobD 
ID3103321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylococcus capsulatus str. Bath 
KingdomBacteria 
Replicon accessionNC_002977 
Strand+ 
Start bp2482686 
End bp2483627 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content68% 
IMG OID637171430 
Productcobalamin biosynthesis protein 
Protein accessionYP_114704 
Protein GI53803638 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1270] Cobalamin biosynthesis protein CobD/CbiB 
TIGRFAM ID[TIGR00380] cobalamin biosynthesis protein CobD 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.731902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATCCA GCACGGAAAA AGCCATTGCG TCGTTTCTCA TGCCCGTGGC CGTCGTCATC 
GACCACTTCC TGGGCGAACC ACGCAAATTC CATCCTCTCG TCGGCTTCGG CCGCCTGGCC 
AACCGGATGG AAACAATCAC CTATGGGCCG CCGGAGTGTT CGGCCAAGGC GCGGCAGATG 
CGCGGAATCG CAGCCGTGAC CGGCCTGCTG TTACCCGCCT GGCTGATATC GCTCCTCCTG 
GCCGGCCATG GTGCGATCGG GGCCGCCATC GCCGGCGCCG GCCTTTACCT GGCGTTGGGC 
GCCCGGAGCC TGTTCGAACA TGCCGAGGCC GTTCGCGATG CCTTGCTGAA TGACGACCTG 
GCGAACGCGC GACGGGCGGT CGGGCGTATC GTCAGCCGCG ACGTTCTGAC CATGGACGCG 
GGACAGATCG CTGCCGCCAC CGTCGAATCG GTGCTCGAGA ACGGTTGCGA TGCGGTGTTC 
GGTGCGCTGT TCTGGTATGC AGCCGGAGGG CTGCCCGGCG TGGTCGTCTA CCGCCTGGCC 
AACACCCTGG ACGCCATGTG GGGATACCGC AACGAACGTT ACCGGGATTT CGGCTGGGCG 
GCGGCCAGGC TGGATGACGT GCTCAATTAT CTTCCCGCCC GGCTCACGGC CATGAGCTAC 
GCACTGTGCG GCCACCTTCC CGCGGCTTTG CGGGCCTGGC GGCATCAGGG CCGGTACTGG 
AAGAGCCCCA ACGCCGGCCC GGTCATGGCA GCCGGGGCCG GAGCGCTGGG CATCGCGCTC 
GGCGGTCCGG CCAGCTACCA CGGCAGCCTG ACACACCGGC CCGCGCTGGG TGACGGACGA 
CCCGCCGAAA CGCGGGACAT CGGGCGCGCC ATCTCCCTCG TCCGGCGTTC CTTGACGCTT 
TGGCTCTGGG CCGCCGTCAT CGGAGGCGTC GCACTTGCTT GA
 
Protein sequence
MESSTEKAIA SFLMPVAVVI DHFLGEPRKF HPLVGFGRLA NRMETITYGP PECSAKARQM 
RGIAAVTGLL LPAWLISLLL AGHGAIGAAI AGAGLYLALG ARSLFEHAEA VRDALLNDDL 
ANARRAVGRI VSRDVLTMDA GQIAAATVES VLENGCDAVF GALFWYAAGG LPGVVVYRLA 
NTLDAMWGYR NERYRDFGWA AARLDDVLNY LPARLTAMSY ALCGHLPAAL RAWRHQGRYW 
KSPNAGPVMA AGAGALGIAL GGPASYHGSL THRPALGDGR PAETRDIGRA ISLVRRSLTL 
WLWAAVIGGV ALA