Gene MCA2254 details

Gene Information

• Locus tag: MCA2254
• Symbol: lspA
• ID: 3103164
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylococcus capsulatus str. Bath
• Kingdom: Bacteria
• Replicon accession: NC_002977
• Strand: +
• Start bp: 2444870
• End bp: 2445346
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637171398
• Product: signal peptidase II
• Protein accession: YP_114672
• Protein GI: 53803699
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0126401
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGATCGT CCATGTTGAA ATGGCTTTGG CTGTCGGTGC TGGTCTTCGC ACTCGACCAG 
CTCAGCAAGC AGATCGTCGA CGCATCGATG CGGCTGTATG AGACGATCCC GCTGCTGCCG 
GTGTTCCAGC TCACCTACCT GCGCAACCAG GGCGCTGCGT TCAGCTTCCT GAGCGAGGCC 
GGCGGTTGGC AGCGCTGGTT TTTCATCGCC CTGTCGGCCA GCGCCACGCT GCTGATCACC 
TACTGGCTCA AGCACATGGA CCGGCGGAAA ACCTGGGAAG CCGCCGCCTG GGCCCTGGTG 
CTGGGCGGTG CCGTCGGCAA CCTGCTGGAC CGGATCGTCT ACGGCTACGT CATCGACTTT 
CTCGACGTGT TCTACGGCGA CTGGCACTGG CCGGCGTTCA ACGTCGCCGA CTCGGCCATC 
ACCGTCGGTA TCGGCATGCT GCTGATCGAT TCGTTCCGGG GCCGCGCGAA CGCCTGA 

 

Protein sequence

MRSSMLKWLW LSVLVFALDQ LSKQIVDASM RLYETIPLLP VFQLTYLRNQ GAAFSFLSEA 
GGWQRWFFIA LSASATLLIT YWLKHMDRRK TWEAAAWALV LGGAVGNLLD RIVYGYVIDF 
LDVFYGDWHW PAFNVADSAI TVGIGMLLID SFRGRANA