Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MCA2251 |
Symbol | mviN |
ID | 3105025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylococcus capsulatus str. Bath |
Kingdom | Bacteria |
Replicon accession | NC_002977 |
Strand | + |
Start bp | 2439546 |
End bp | 2441087 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637171395 |
Product | membrane protein MviN |
Protein accession | YP_114669 |
Protein GI | 53803702 |
COG category | [R] General function prediction only |
COG ID | [COG0728] Uncharacterized membrane protein, putative virulence factor |
TIGRFAM ID | [TIGR01695] integral membrane protein MviN |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0136199 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCTGAAAT CCACCGCCAT GGTGGGTTCC ATGACACTGA TTTCACGTCT GCTGGGCTTC GTCCGCGACC TGATCATCGC GCGGACCTTC GGTGCCGACG CGGCCACGGA TGCGTTCTTC GTCGCCTTCA GGATACCCAA TTTTCTACGC CGGCTTTTTG CCGAAGGCGC TTTCTCACAG GGGCTGGTGC CCGTCCTCTC GGAACTGCGC GTCAGCAGTG ACGCTGCGAC TGTGCGGCAG ACCATCGCCC GCATGGCGGG TACACTGGGG CTGGTGGCGG CCCTGCTCAC CTGCCTGGGC ATGGCTGCTG CGCCTGTCCT GACCTTTCTG TTCGCTCCGG GTTTCCAGGC CCAGCCTTTC CAATTCGGCC TGACGGTAGA GATGCTGCGC ATCACCTTCC CGTACCTCTT CTTCGTCACG CTGACGGCGT TCGCCGGCGG CGTTCTGCAT ACCTGGGGAC AATTCGCGGT CCCCGCGTTC ACGCCGGCCC TGCTCAACCT GGCGATGATC GCCGCGGCCC TGTGGCTGGC GCCGCTGTTG GACTTGCCTG TGGAGGCTCT GGCTTGGGGT GTTTTCGCCG CCGGCTTGCT GCAACTGGCC TTTCAGCTTC CTTCGCTGTG GGGCATTCGC CAGATCTCCC TGCCTTGCCC GGTCTGGCGG GACCGGGAAG TCCTGCGCAT GTTCAAACTG ATGGGGCCGG CGATCCTTGG CGTCTCCGCG ACCCAGATCA ACCTGCTCCT GGACACGCTG GTGGCATCGT TCCTGGTCTC CGGTAGCGTA TCCTGGTTAT ATTACTCGGA CCGGCTGGTG GAATTGCCGC AAGGGCTCCT GGGCGTGGCC ATCGGAACGG CCATCCTGCC GCACCTGGCC GCCGGCCATC TCGACCATGA CCGCGACGGC TTCTCCCGGA CGCTGGACTG GGCCCTGCGC TGGGTCGTCC TGCTGGGGCT GCCCGCCACA CTGGGACTGA TGATTCTCGC CAAACCGCTG GTATTCACCC TGTTCGAACA CGACGAATTT TCTGACCACG ACACGGAAAT GGCGAGCCGC AGCCTGATCG CTTACGCGGC CGGACTGCCA GGCGCCGTCG CCGTCAAGGT GCTGGCCTCC GGATTCAGCG CCCGCCGGGA CGTCCGCACC CCTTTGCGGT ATGGTCTGTA CGCGATCGCA GCCAATGGCG TGCTGGCCCC GGCCCTGGCT TTTCTGCTGG CTCCCTACGG CTGGGGACAC GCGGGCCTGG CTGCCGCGAC CGCGGCGGCG ACCTCACTCA ACGCAGCGCT GCTGCTCCGC AAACTGCTGG CCGAAGGCAG CTATCGGCCG GACGCCTCCT GGCGCCGCTA CGGGACCCAT CTGGTCATCG CGAATATCGC GATGGGCGCG CTGCTCACCC AAGCCCTCGA GTCGCCTTGG GCCGACGCGT CCGTGTCCGA ACGCATCCTC CGTCTCGGCC TGTGGATAGC GGCCGGATTC GCCGTCTACT TGGTCAGCTT GCTGCTGGCG GGCCTGCGTC CCCGTCACCT GCTCCTTTCC GAAAAGGCGT GA
|
Protein sequence | MLKSTAMVGS MTLISRLLGF VRDLIIARTF GADAATDAFF VAFRIPNFLR RLFAEGAFSQ GLVPVLSELR VSSDAATVRQ TIARMAGTLG LVAALLTCLG MAAAPVLTFL FAPGFQAQPF QFGLTVEMLR ITFPYLFFVT LTAFAGGVLH TWGQFAVPAF TPALLNLAMI AAALWLAPLL DLPVEALAWG VFAAGLLQLA FQLPSLWGIR QISLPCPVWR DREVLRMFKL MGPAILGVSA TQINLLLDTL VASFLVSGSV SWLYYSDRLV ELPQGLLGVA IGTAILPHLA AGHLDHDRDG FSRTLDWALR WVVLLGLPAT LGLMILAKPL VFTLFEHDEF SDHDTEMASR SLIAYAAGLP GAVAVKVLAS GFSARRDVRT PLRYGLYAIA ANGVLAPALA FLLAPYGWGH AGLAAATAAA TSLNAALLLR KLLAEGSYRP DASWRRYGTH LVIANIAMGA LLTQALESPW ADASVSERIL RLGLWIAAGF AVYLVSLLLA GLRPRHLLLS EKA
|
| |