| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA2232 |
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| Symbol | |
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| ID | 3104225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 2423503 |
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| End bp | 2424930 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637171377 |
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| Product | outer membrane efflux family protein |
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| Protein accession | YP_114651 |
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| Protein GI | 53803742 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.104294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGG TTGTATGTCG TTTCCTCGCT GTTCTGGCGT CGTTGACGTT ACAAGCCTGC
GGAATTCCTG ATATGACAAC CAGGACAGCG GACGTCCATT TGCCAGATCA GTTCAAGGCC
GGGCCGACCG ACAAATCAAA TTCAGCAATC ATCAAATGGA ATGACTTCTT TGAAGACGAG
AATCTTTTGA ATCTCCTGGA AACTGCCGTT GCCAACAACA AGGACGTAAA TATCATGATG
CAGCGTATCA GCGCTGCCGA AAATGAAATT CAGGCGAGGC GTGGTGCGTA CCTGCCTTTC
ATCAGGACCG GCGCCAACGC CGGGGGAGAA AAACCCGGCG ACTATACCTT CAATGGCGCC
GTCGAACGCA ATCTTCCGCT TGCAGGAAAT CCGTTTCCGA CATTTGTAGG CGACTATCAG
TTCGGGCTTA CATCGACGTG GGAGCTGGAC ATCTGGCGAA AACTTAGGAA TGCCACTGAG
GTGGCCATGC TCGAATACAT GGCGACCATG GAAGGAAAGA ACTTCCTCAT CACGAATCTC
GTAGCCGATG TGGCTCACTC CTACTATGAA CTCGTCACGC TGGATAATCA GCTGGAAAAT
CTCGATCAGA ACATAGCGAT TCAGCAGGAT GCATTGCGGA TCGTCAAAGA GCTTCAGAAG
TTTGCAAGAG CAGATGCTCT CGCCGTCAAA CGTTACGAAG CTGAAGTGGC CAAGAACCAG
AGTAAAAGGT ACGAGATCAA GCAGGAAATC GTCGTCGTAG AGAATCGGAT CAATTACCTC
CTCGGCCGGA CGCCTCAGCC TATCAAGCGG ACCTCGGCGG GCTTCCTGGA TCTCGAACCC
AAACTCATCA ACACCGGTAT TCCATCACAA TTGCTCCTGA ACAGACCTGA TATCAGAAAG
GCCGAGCTGG ATCTGGCTGC GGCCCAACTG AACATCGAGG TTGCGAGGGC TGAGTTTTTT
CCTTCTTTCG GCATCAGAGC AGGAGTTGGA TTCGACGCAT TTGCAATGAA ATATCTTATC
AATACACCGG AATCATTGGC AGCCTATGTT GCGGGCGAAC TGGTTGCCCC CCTGGTCAAT
AAAAATGCCA TCATAGCCAA TTTCAAAACC GCCAATGTCA AACAGGTCGA AGCGGCATTC
GAATATGAAA AGTCCATTAT CAACGCCTAT GTTGAAGTTC TGAACCAGAT ATCGAATATC
GAGAATACGC GGAAGAGCTT CAACTTAAAG AAGGACCAGG TTGACCACCT GGTCAAATCG
ATCGATATTT CTATTCAACT CTTCAAATCC GCAAGAACGT TCTATCTGGA TGTATTGACG
ACTCAACGGG ATGCTCTCGA AGCCAAACGT GAGTTGATTG AAACAAAGCA AAAACAGGTA
TTTGCGATGG TCGACCTTTA TAAGTCCCTT GGCGGAGGCT GGAGATGA
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| Protein sequence | MTKVVCRFLA VLASLTLQAC GIPDMTTRTA DVHLPDQFKA GPTDKSNSAI IKWNDFFEDE
NLLNLLETAV ANNKDVNIMM QRISAAENEI QARRGAYLPF IRTGANAGGE KPGDYTFNGA
VERNLPLAGN PFPTFVGDYQ FGLTSTWELD IWRKLRNATE VAMLEYMATM EGKNFLITNL
VADVAHSYYE LVTLDNQLEN LDQNIAIQQD ALRIVKELQK FARADALAVK RYEAEVAKNQ
SKRYEIKQEI VVVENRINYL LGRTPQPIKR TSAGFLDLEP KLINTGIPSQ LLLNRPDIRK
AELDLAAAQL NIEVARAEFF PSFGIRAGVG FDAFAMKYLI NTPESLAAYV AGELVAPLVN
KNAIIANFKT ANVKQVEAAF EYEKSIINAY VEVLNQISNI ENTRKSFNLK KDQVDHLVKS
IDISIQLFKS ARTFYLDVLT TQRDALEAKR ELIETKQKQV FAMVDLYKSL GGGWR
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